RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IDH3BO43837 385 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 BMP15O95972 392 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 MMP1P03956 469 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PRKACBP22694 351 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF132P52740 706 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 NR1H2P55055 460 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CREB5Q02930 508 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 GFPT1Q06210 699 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF829Q3KNS6 432 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRRC24Q50LG9 513 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TWF2Q6IBS0 349 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CCDC84Q86UT8 332 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANKMY2Q8IV38 441 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 SIX5Q8N196 739 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 MARVELD2Q8N4S9 558 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TTLL11Q8NHH1 800 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF594Q96JF6 807 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TCF12Q99081 682 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ISCA1Q9BUE6 129 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 EHD1Q9H4M9 534 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 C17orf75Q9HAS0 396 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRNAU1APQ9NX07 287 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PADI4Q9UM07 663 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ERVK-11Q9UQG0 969 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PCDHB6Q9Y5E3 794 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CEPT1Q9Y6K0 416 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 C15orf38-AP3S2A0A0A6YYH1 394 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ESRRBO95718 433 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 KLRC1P26715 233 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ETV3P41162 512 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ENTPD1P49961 510 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TIMM10P62072 90 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TUBA3CQ13748 450 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MPP2Q14168 576 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 HLFQ16534 295 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TMEM63BQ5T3F8 832 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 C6orf163Q5TEZ5 329 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 CYP2U1Q7Z449 544 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ARPINQ7Z6K5 226 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANKRD42Q8N9B4 389 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SYN2Q92777 582 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SEMA4AQ9H3S1 761 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF696Q9H7X3 374 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MTRF1LQ9UGC7 380 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 PHTF1Q9UMS5 762 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 PACSIN2Q9UNF0 486 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MYH4Q9Y623 1939 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SPEF2Q9C093 1822 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF536O15090 1300 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 CENPBD1B2RD01 187 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 BTBD18B2RXH4 712 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 PSMA7O14818 248 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MCF2LO15068 1137 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 RNF113AO15541 343 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 AQP9O43315 295 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 RPN1P04843 607 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 BRAFP15056 766 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 FOSL1P15407 271 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MUTP22033 750 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 BDNFP23560 247 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 FOXN2P32314 431 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 COPB2P35606 906 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC16A2P36021 539 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLCO1A2P46721 670 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 METAP2P50579 478 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 CDK9P50750 372 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 PTENP60484 403 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 DHX34Q14147 1143 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 KRT81Q14533 505 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 KCNJ8Q15842 424 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 NTRK3Q16288 839 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MMEL1Q495T6 779 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TMTC4Q5T4D3 741 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TTI2Q6NXR4 508 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRRC6Q86X45 466 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SCYL3Q8IZE3 742 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 LZTR1Q8N653 840 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ENAHQ8N8S7 591 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 PCYOX1LQ8NBM8 494 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SPATA17Q96L03 361 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 CRAMP1Q96RY5 1269 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 OLFM1Q99784 485 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF287Q9HBT7 754 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms