RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, human

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC144A-208	ENST00000428950	SYDE2	Q5VT97	1194 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	OLFML1	Q6UWY5	402 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MIGA2	Q7L4E1	593 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	GPR149	Q86SP6	731 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PRIMA1	Q86XR5	153 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	RHOT1	Q8IXI2	618 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FAM43A	Q8N2R8	423 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	JADE3	Q92613	823 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FUBP1	Q96AE4	644 aa	Known RBP	4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SYNPO2L	Q9H987	977 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	GALNT9	Q9HCQ5	603 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TMEM74B	Q9NUR3	256 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	USP25	Q9UHP3	1055 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TRHDE	Q9UKU6	1024 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	AATK	Q6ZMQ8	1374 aa		4.26	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TCRBV7S2A1N4T	A0A589	114 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	ZAR1L	A6NP61	321 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	KIAA0391	O15091	583 aa	Known RBP	4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CKB	P12277	381 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	C5AR1	P21730	350 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CDKN1C	P49918	316 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SLC16A1	P53985	500 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CTXN1	P60606	82 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	NOMO3	P69849	1222 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CREM	Q03060	361 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	ATP2B3	Q16720	1220 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	NOMO2	Q5JPE7	1267 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	DACT2	Q5SW24	774 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FOXR2	Q6PJQ5	311 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SLC44A3	Q8N4M1	653 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FITM2	Q8N6M3	262 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	DCBLD1	Q8N8Z6	715 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	NUP133	Q8WUM0	1156 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	RAB24	Q969Q5	203 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	HDAC10	Q969S8	669 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	BOD1	Q96IK1	185 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TMX3	Q96JJ7	454 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	RIOX1	Q9H6W3	641 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TDP1	Q9NUW8	608 aa		4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TES	Q9UGI8	421 aa	Known RBP	4.25	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MAST3	O60307	1309 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	KLHL33	A6NCF5	533 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FZD9	O00144	591 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	XPOT	O43592	962 aa	Known RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA12	O60330	932 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	HAUS5	O94927	633 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	ESRRB	O95718	433 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MYBL2	P10244	700 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CDK11B	P21127	795 aa	Known RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	GUCY2F	P51841	1108 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	KRT85	P78386	507 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CDC42EP1	Q00587	391 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SLFN5	Q08AF3	891 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MPP3	Q13368	585 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MTMR1	Q13613	665 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CYP2A13	Q16696	494 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	RSPH3	Q86UC2	560 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TBC1D15	Q8TC07	691 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SLC9A6	Q92581	669 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	NACC2	Q96BF6	587 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MTMR8	Q96EF0	704 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MARS2	Q96GW9	593 aa	Known RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FAXDC2	Q96IV6	333 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950		Q96MF0	132 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MED15	Q96RN5	788 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PNKP	Q96T60	521 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	GSTO2	Q9H4Y5	243 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	HSFX1	Q9UBD0	423 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MTO1	Q9Y2Z2	717 aa	Known RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA8	Q9Y5G5	932 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA7	Q9Y5G6	932 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA6	Q9Y5G7	932 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHGA3	Q9Y5H0	932 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SBNO2	Q9Y2G9	1366 aa		4.24	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SHTN1	A0MZ66	631 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	KIAA0355	O15063	1070 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SGTA	O43765	313 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	ERN1	O75460	977 aa	Known RBP	4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	FCER1A	P12319	257 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	SLC6A4	P31645	630 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MPL	P40238	635 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	CLK3	P49761	638 aa	Known RBP	4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	VAV2	P52735	878 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	ITK	Q08881	620 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PRR16	Q569H4	304 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	STRIP1	Q5VSL9	837 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	DPY19L2P1	Q6NXN4	242 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	IFI44	Q8TCB0	444 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TEKT5	Q96M29	485 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	TBCCD1	Q9NVR7	557 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	IPP	Q9Y573	584 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	PCDHA13	Q9Y5I0	950 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MRFAP1	Q9Y605	127 aa		4.23	□□□□□ -1.73
CCDC144A-208	ENST00000428950	MYADML2	A6NDP7	307 aa		4.22	□□□□□ -1.73
CCDC144A-208	ENST00000428950	GABRD	O14764	452 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms