RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ADPGKQ9BRR6 497 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 INTS2Q9H0H0 1204 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 CXXC1Q9P0U4 656 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 NUB1Q9Y5A7 615 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 TIMM13Q9Y5L4 95 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 MROH7Q68CQ1 1323 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 SMIM28A0A1B0GU29 152 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 ARL5CA6NH57 179 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 CAPN15O75808 1086 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 HLA-DRAP01903 254 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 C4BPAP04003 597 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 POU5F1BQ06416 359 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 PSMD6Q15008 389 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 TRAPPC11Q7Z392 1133 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 BADQ92934 168 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 UBE2TQ9NPD8 197 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 PLCB1Q9NQ66 1216 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 DNAJB4Q9UDY4 337 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 HMGXB4Q9UGU5 601 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 CHORDC1Q9UHD1 332 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 SPTLC1O15269 473 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 PHACTR2O75167 634 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 CFHP08603 1231 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 MCF2P10911 925 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 RAG1P15918 1043 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZSCAN20P17040 1043 aaPredicted RBP10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 KRT9P35527 623 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 PIK3CAP42336 1068 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 TBX2Q13207 712 aaPredicted RBP10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 CLLU1OSQ5K130 101 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 UBE2Q1Q7Z7E8 422 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 ABHD8Q96I13 439 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 KREMEN1Q96MU8 473 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 TTYH3Q9C0H2 523 aa10.27□□□□□ -0.76
HMGCLL1-206ENST00000428842 TTC3P53804 2025 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 GPR182O15218 404 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 FGFR1OPO95684 399 aaKnown RBP10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM191BP0C7N4 346 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 UCHL3P15374 230 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 RABGGTBP53611 331 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 C2CD6Q53TS8 623 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 WDR59Q6PJI9 974 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 SNX27Q96L92 541 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 GPR88Q9GZN0 384 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 GANQ9H2C0 597 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 AGAP1Q9UPQ3 857 aa10.27□□□□□ -0.77
HMGCLL1-206ENST00000428842 USP34Q70CQ2 3546 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 USP27XA6NNY8 438 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 FOXN3O00409 490 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 ENPP3O14638 875 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CTIFO43310 598 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 GFPT2O94808 682 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 GNA14O95837 355 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CLTAP09496 248 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CLCNKBP51801 687 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 NCBP1Q09161 790 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 NCOA4Q13772 614 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 DSC3Q14574 896 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 NFIL3Q16649 462 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 WDR72Q3MJ13 1102 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZACNQ401N2 412 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 KLHDC7AQ5VTJ3 777 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 KRT39Q6A163 491 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 FAM109BQ6ICB4 259 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM173Q86WV6 379 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 PALB2Q86YC2 1186 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CXorf38Q8TB03 319 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 BAP1Q92560 729 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 GTPBP4Q9BZE4 634 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 SMYD3Q9H7B4 428 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 METTL14Q9HCE5 456 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 RAB20Q9NX57 234 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 DDHD2O94830 711 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 GRM5P41594 1212 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 PLEKHG4Q58EX7 1191 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 GBP6Q6ZN66 633 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 LRRC8AQ8IWT6 810 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 DPF3Q92784 378 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 ERGIC2Q96RQ1 377 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CGRRF1Q99675 332 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 CCDC94Q9BW85 323 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 TRMT1Q9NXH9 659 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 DNAJC12Q9UKB3 198 aa10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 TDRD15B5MCY1 1934 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-206ENST00000428842 A0A0U1RQF3 1178 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 GRXCR1A8MXD5 290 aa10.25□□□□□ -0.77
HMGCLL1-206ENST00000428842 C9IYK1 514 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms