RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MAP3K20Q9NYL2 800 aaKnown RBP8.95□□□□□ -0.98
CD44-208ENST00000428726 ASIC3Q9UHC3 531 aa8.95□□□□□ -0.98
CD44-208ENST00000428726 DAAM1Q9Y4D1 1078 aa8.95□□□□□ -0.98
CD44-208ENST00000428726 CES2O00748 559 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 IQCF3P0C7M6 154 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 CXCL8P10145 99 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 RARAP10276 462 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 TXNP10599 105 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 ALDH5A1P51649 535 aaPredicted RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 MNAT1P51948 309 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 EPHB4P54760 987 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 GHRHRQ02643 423 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 GNPTABQ3T906 1256 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 CYP4F22Q6NT55 531 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 C1orf131Q8NDD1 294 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 CDCA5Q96FF9 252 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 GINM1Q9NU53 330 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 HOXC10Q9NYD6 342 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 INTUQ9ULD6 942 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 ANKRD62A6NC57 917 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 EBAG9O00559 213 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 STBD1O95210 358 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 VNN1O95497 513 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 SUPT20HL2P0C7V6 817 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 CCDC172P0C7W6 258 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 TNFRSF8P28908 595 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 GTF2H1P32780 548 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 PHKA2P46019 1235 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 MFAP3P55082 362 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 TAS2R40P59535 323 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 MAGOHP61326 146 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 IFI35P80217 286 aaPredicted RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 ALCAMQ13740 583 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 SUPT20HL1Q3ZLR7 823 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 MIS18BP1Q6P0N0 1132 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 CCDC137Q6PK04 289 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 CRELD2Q6UXH1 353 aaPredicted RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 UBA3Q8TBC4 463 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 STRA6Q9BX79 667 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 MAGEB5Q9BZ81 275 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 AZI2Q9H6S1 392 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 HMGXB4Q9UGU5 601 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 CAPN7Q9Y6W3 813 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 SYNJ2BP-COX16A0A087WUM0 186 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 E7EVH7 732 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 F8VP50 259 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 OATP04181 439 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 ECHS1P30084 290 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 ADCYAP1R1P41586 468 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 RPL21P46778 160 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 JAK3P52333 1124 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 PAK2Q13177 524 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 PLCB4Q15147 1175 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 LONRF1Q17RB8 773 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 WDR72Q3MJ13 1102 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 WDR44Q5JSH3 913 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 PRELID2Q8N945 189 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 EPS8L3Q8TE67 593 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 C9orf72Q96LT7 481 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 COX16Q9P0S2 106 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
CD44-208ENST00000428726 GTF3C4Q9UKN8 822 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 PNMA2Q9UL42 364 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 NENFQ9UMX5 172 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 AKT3Q9Y243 479 aa8.94□□□□□ -0.98
CD44-208ENST00000428726 A0A0A6YYK5 440 aaPredicted RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 CAND2O75155 1236 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 PPFIA4O75335 1185 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 GNA15P30679 374 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 RGS7P49802 495 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 SLC29A2Q14542 456 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 TAF5Q15542 800 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 EMBQ6PCB8 327 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 GSTA5Q7RTV2 222 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 MAP4K3Q8IVH8 894 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD44-208ENST00000428726 ATP8B4Q8TF62 1192 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 PBKQ96KB5 322 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 PAIP2Q9BPZ3 127 aaKnown RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 TAF1DQ9H5J8 278 aaPredicted RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 KLK14Q9P0G3 267 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 UTP11Q9Y3A2 253 aaKnown RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 SYNGAP1Q96PV0 1343 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 MCM3APO60318 1980 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 DGAT1O75907 488 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 ERLIN2O94905 339 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 LYPLA2O95372 231 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 RALAP11233 206 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 IGFBP6P24592 240 aaPredicted RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 NCKAP1LP55160 1127 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 NOP14P78316 857 aaKnown RBP8.93□□□□□ -0.98
CD44-208ENST00000428726 NCOA4Q13772 614 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 SH3PXD2AQ5TCZ1 1133 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 JAMLQ86YT9 394 aa8.93□□□□□ -0.98
CD44-208ENST00000428726 C12orf29Q8N999 325 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms