RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 ROR1Q01973 937 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 CYP4A11Q02928 519 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 ELAVL2Q12926 359 aaKnown RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PPP2R5DQ14738 602 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PLA2G2CQ5R387 149 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 HEATR6Q6AI08 1181 aaKnown RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 SLC8B1Q6J4K2 584 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PDXDC1Q6P996 788 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 HACE1Q8IYU2 909 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 KDF1Q8NAX2 398 aaPredicted RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 IRF7Q92985 503 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 FAM20AQ96MK3 541 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PPP1R10Q96QC0 940 aaKnown RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 HSD17B14Q9BPX1 270 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 CORO1BQ9BR76 489 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 C22orf23Q9BZE7 217 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 FZD8Q9H461 694 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 ZSWIM4Q9H7M6 989 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 TRPV4Q9HBA0 871 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 ZFP14Q9HCL3 533 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 ZMIZ1Q9ULJ6 1067 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 NBEAQ8NFP9 2946 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PDCD11Q14690 1871 aaKnown RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 IGF2RP11717 2491 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 LAMA5O15230 3695 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 A0A087WWV3 80 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 TBX3O15119 743 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 EPN2O95208 641 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 ZNF806P0C7X5 589 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 GJA1P17302 382 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 BRCC3P46736 316 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 RAP1GAPP47736 663 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 CLCNKBP51801 687 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 MLLT6P55198 1093 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 CCT2P78371 535 aaKnown RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 SOX4Q06945 474 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 NCBP1Q09161 790 aaKnown RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 TFDP1Q14186 410 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 ACAP1Q15027 740 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 UPP1Q16831 310 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 FAM187BQ17R55 369 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 AASDHQ4L235 1098 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 EARS2Q5JPH6 523 aaKnown RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 STPG1Q5TH74 334 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 EEF1DP3Q658K8 133 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 CDCA2Q69YH5 1023 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 IL31Q6EBC2 164 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 NCAPH2Q6IBW4 605 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 PPP4R3AQ6IN85 833 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 PKN3Q6P5Z2 889 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 UNQ6494/PRO21346Q6UXR6 183 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 OTUD6AQ7L8S5 288 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 WDR5BQ86VZ2 330 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 NOSTRINQ8IVI9 506 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 TCEAL8Q8IYN2 117 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 ZNF461Q8TAF7 563 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 SMARCD2Q92925 531 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 LRRC3BQ96PB8 259 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 LSM14BQ9BX40 385 aaKnown RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 POLR3FQ9H1D9 316 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-203ENST00000428552 ARRDC1-AS1Q9H2J1 176 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 SMOC1Q9H4F8 434 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 GPRC5CQ9NQ84 441 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 WDR70Q9NW82 654 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 CEP72Q9P209 647 aa8.9□□□□□ -0.98
CSTF1-203ENST00000428552 SMG1Q96Q15 3661 aaKnown RBP8.9□□□□□ -0.99
CSTF1-203ENST00000428552 ITPR1Q14643 2758 aa8.9□□□□□ -0.99
CSTF1-203ENST00000428552 ANKRD11Q6UB99 2663 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 PKD1L2Q7Z442 2459 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 AXIN1O15169 862 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 DGAT1O75907 488 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 B3GAT3O94766 335 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 TOP3BO95985 862 aaKnown RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 ATF2P15336 505 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 RPS6KB1P23443 525 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 RBM25P49756 843 aaKnown RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 RARRES1P49788 294 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 EPHA5P54756 1037 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 FCHO2Q0JRZ9 810 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 CCINQ13939 588 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 MRPL58Q14197 206 aaKnown RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 KRT32Q14532 448 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 ANKS3Q6ZW76 656 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 KBTBD6Q86V97 674 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 MFSD6LQ8IWD5 586 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 TPH2Q8IWU9 490 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 ZSCAN18Q8TBC5 510 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 DEPDC1BQ8WUY9 529 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 BSNDQ8WZ55 320 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 EIF2AK1Q9BQI3 630 aaKnown RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 LRRC3Q9BY71 257 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 CCDC113Q9H0I3 377 aa8.89□□□□□ -0.99
CSTF1-203ENST00000428552 SLKQ9H2G2 1235 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-203ENST00000428552 ANKEF1Q9NU02 776 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms