RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 WDFY4Q6ZS81 3184 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 ANHXE9PGG2 379 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 CCL16O15467 120 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 LRG1P02750 347 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 PAX3P23760 479 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 MCM4P33991 863 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 TXLNAP40222 546 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 BRCC3P46736 316 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 HTR4Q13639 388 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 PABPC1LQ4VXU2 614 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 TPGS2Q68CL5 300 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 ZNF280DQ6N043 979 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 MYCT1Q8N699 235 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 TMEM105Q8N8V8 129 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 FEZF2Q8TBJ5 459 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 SHDQ96IW2 340 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 REEP2Q9BRK0 252 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 CCDC39Q9UFE4 941 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 VWA8A3KMH1 1905 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 TRIP11Q15643 1979 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 DOCK8Q8NF50 2099 aa16.87■□□□□ 0.29
CTDSP1-202ENST00000428361 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 K7ENM7 598 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 STK25O00506 426 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 PRRG1O14668 218 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 ADAM12O43184 909 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 CFHP08603 1231 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 CYP3A5P20815 502 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 ZNF131P52739 623 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 SOX4Q06945 474 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 CUL4AQ13619 759 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 SF3A1Q15459 793 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 CD302Q8IX05 232 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 ELMOD1Q8N336 334 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 KRI1Q8N9T8 703 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 C3orf58Q8NDZ4 430 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 LARP4BQ92615 738 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 RAD54LQ92698 747 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 SUSD3Q96L08 255 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 CCSER1Q9C0I3 900 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 SLC2A4RGQ9NR83 387 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 NUMBLQ9Y6R0 609 aa16.86■□□□□ 0.29
CTDSP1-202ENST00000428361 TRAK2O60296 914 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 PIGRP01833 764 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 ATF2P15336 505 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 PLCG1P19174 1290 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 PFKPQ01813 784 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 ROR1Q01973 937 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 SLC10A6Q3KNW5 377 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 CWF19L1Q69YN2 538 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 CD300LGQ6UXG3 332 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 RSAD2Q8WXG1 361 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 FGF13Q92913 245 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 KIF12Q96FN5 646 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 ZHX3Q9H4I2 956 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 AVENQ9NQS1 362 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 STK17AQ9UEE5 414 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 TBX20Q9UMR3 447 aa16.85■□□□□ 0.29
CTDSP1-202ENST00000428361 H0Y858 1186 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 I3L4J1 428 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 ZNF197O14709 1029 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 OGTO15294 1046 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 NARSO43776 548 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 ABLIM3O94929 683 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 CXCL8P10145 99 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 PTPN2P17706 415 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 LRPAP1P30533 357 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 DHX8Q14562 1220 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 CTXN3Q4LDR2 81 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 SLFN12LQ6IEE8 588 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 CCDC105Q8IYK2 499 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 TCEAL8Q8IYN2 117 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 LEMD2Q8NC56 503 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 ARHGEF3Q9NR81 526 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 GDE1Q9NZC3 331 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 PCDHB8Q9UN66 801 aa16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 MRPS23Q9Y3D9 190 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-202ENST00000428361 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 TTC26A0AVF1 554 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 WDR27A2RRH5 827 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 PROB1E7EW31 1015 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 DDIT3P35638 169 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 YWHAHQ04917 246 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 MRPL58Q14197 206 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 MCM6Q14566 821 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 KARSQ15046 597 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 IQCEQ6IPM2 695 aa16.83■□□□□ 0.28
CTDSP1-202ENST00000428361 USP37Q86T82 979 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms