RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
DDX39B-208ENST00000428098 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
DDX39B-208ENST00000428098 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
DDX39B-208ENST00000428098 BACE2Q9Y5Z0 518 aa13.23□□□□□ -0.29
DDX39B-208ENST00000428098 PDCD11Q14690 1871 aaKnown RBP13.23□□□□□ -0.29
DDX39B-208ENST00000428098 CFAP46Q8IYW2 2715 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 EML1O00423 815 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 CHADO15335 359 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 ASAP2O43150 1006 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 LRG1P02750 347 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 CHMLP26374 656 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 TKTP29401 623 aaKnown RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 CDC27P30260 824 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 PSMC5P62195 406 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 NUCB1Q02818 461 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 MBTD1Q05BQ5 628 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 UAP1L1Q3KQV9 507 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 C1orf228Q6PIY5 440 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 PDZD4Q76G19 769 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 REXO1Q8N1G1 1221 aaKnown RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 TRIM6Q9C030 488 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-208ENST00000428098 CEP72Q9P209 647 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 APC2O95996 2303 aa13.22□□□□□ -0.29
DDX39B-208ENST00000428098 ACACAQ13085 2346 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 ESYT2A0FGR8 921 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 I3L4J1 428 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 ZBTB39O15060 712 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 ROR1Q01973 937 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 TNK2Q07912 1038 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 SCAPQ12770 1279 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 ELAVL2Q12926 359 aaKnown RBP13.21□□□□□ -0.29
DDX39B-208ENST00000428098 TEAD2Q15562 447 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
DDX39B-208ENST00000428098 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
DDX39B-208ENST00000428098 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 C6orf50Q9HD87 102 aa13.21□□□□□ -0.29
DDX39B-208ENST00000428098 RBM28Q9NW13 759 aaKnown RBP13.21□□□□□ -0.29
DDX39B-208ENST00000428098 A0A1B0GUA9 196 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 PRRG1O14668 218 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
DDX39B-208ENST00000428098 MYL4P12829 197 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 USP11P51784 963 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 EPHA5P54756 1037 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
DDX39B-208ENST00000428098 RTN1Q16799 776 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 SLC27A1Q6PCB7 646 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-208ENST00000428098 YAF2Q8IY57 180 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 SHKBP1Q8TBC3 707 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 CYP4F11Q9HBI6 524 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 SLC8A2Q9UPR5 921 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 INVSQ9Y283 1065 aa13.2□□□□□ -0.3
DDX39B-208ENST00000428098 NUP205Q92621 2012 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 SGSM2O43147 1006 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 IGHDP01880 384 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 PRB1P04280 392 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 THP07101 528 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ATF2P15336 505 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ELF1P32519 619 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
DDX39B-208ENST00000428098 BRCC3P46736 316 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ARPP19P56211 112 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 FAM193AP78312 1265 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 SIM1P81133 766 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-208ENST00000428098 EMC2Q15006 297 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■□□□□ 8.3
DDX39B-208ENST00000428098 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 XPNPEP1Q9NQW7 623 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 INSL5Q9Y5Q6 135 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 ZMYM2Q9UBW7 1377 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
DDX39B-208ENST00000428098 B3GAT3O94766 335 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 SEC24BO95487 1268 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 TDP2O95551 362 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 RFC5P40937 340 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms