RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 UIMC1Q96RL1 719 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 HIST1H2AJQ99878 128 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 NOL10Q9BSC4 688 aaKnown RBP7.02□□□□□ -1.29
C9orf3-205ENST00000427193 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
C9orf3-205ENST00000427193 TOMM22Q9NS69 142 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 TMEM260Q9NX78 707 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 NCDNQ9UBB6 729 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 TRPS1Q9UHF7 1281 aa7.02□□□□□ -1.29
C9orf3-205ENST00000427193 TNRC6CQ9HCJ0 1690 aaKnown RBP7.02□□□□□ -1.29
C9orf3-205ENST00000427193 KCPQ6ZWJ8 1503 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 TNRC18O15417 2968 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 PPP1R12AO14974 1030 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 APOL3O95236 402 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 ZNF853P0CG23 659 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 GNAT2P19087 354 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 CTCFP49711 727 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 NANOS3P60323 173 aaKnown RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 PABPC4Q13310 644 aaKnown RBP eCLIP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 AMOTQ4VCS5 1084 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 DCAF17Q5H9S7 520 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 APBB1IPQ7Z5R6 666 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 KIF18BQ86Y91 864 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 SYNPOQ8N3V7 929 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 MB21D1Q8N884 522 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 ST8SIA2Q92186 375 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 LTV1Q96GA3 475 aaPredicted RBP7.01□□□□□ -1.29
C9orf3-205ENST00000427193 TTPALQ9BTX7 342 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 POFUT1Q9H488 388 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 PKD1L3Q7Z443 1732 aa7.01□□□□□ -1.29
C9orf3-205ENST00000427193 RGPD2P0DJD1 1756 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 A0A0A6YYK5 440 aaPredicted RBP7□□□□□ -1.29
C9orf3-205ENST00000427193 NRP1O14786 923 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 FAM20BO75063 409 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 CD40P25942 277 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 UNQ6494/PRO21346Q6UXR6 183 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 MRGPREQ86SM8 312 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 ZNF575Q86XF7 245 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 WDR63Q8IWG1 891 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 RPUSD2Q8IZ73 545 aaKnown RBP7□□□□□ -1.29
C9orf3-205ENST00000427193 ZNF276Q8N554 614 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 PPP1R14CQ8TAE6 165 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 SREK1Q8WXA9 508 aaKnown RBP7□□□□□ -1.29
C9orf3-205ENST00000427193 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
C9orf3-205ENST00000427193 LENG9Q96B70 501 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 ZG16BQ96DA0 208 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 PGBD4Q96DM1 585 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 SOX7Q9BT81 388 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 ZMAT4Q9H898 229 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 IL16Q14005 1332 aa7□□□□□ -1.29
C9orf3-205ENST00000427193 KIF13BQ9NQT8 1826 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 PPFIA2O75334 1257 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 ASMTLO95671 621 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 GAAP10253 952 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 ATP2A2P16615 1042 aaKnown RBP6.99□□□□□ -1.29
C9orf3-205ENST00000427193 LRRC32Q14392 662 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 LAIR1Q6GTX8 287 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 SMIM5Q71RC9 77 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 UNC5BQ8IZJ1 945 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 EFHBQ8N7U6 833 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 IL17REQ8NFR9 667 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 KANSL2Q9H9L4 492 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 IFT57Q9NWB7 429 aa6.99□□□□□ -1.29
C9orf3-205ENST00000427193 KDM6AO15550 1401 aaPredicted RBP6.99□□□□□ -1.29
C9orf3-205ENST00000427193 MRC1P22897 1456 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 A0A0G2JLW4 131 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 GRXCR1A8MXD5 290 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 GAS7O60861 476 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 F2P00734 622 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 PHKG2P15735 406 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 LBX1P52954 281 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 RIPK4P57078 832 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 SLFN5Q08AF3 891 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 PLEKHO1Q53GL0 409 aaPredicted RBP6.98□□□□□ -1.29
C9orf3-205ENST00000427193 RHOUQ7L0Q8 258 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 RAPGEF4Q8WZA2 1011 aa6.98□□□□□ -1.29
C9orf3-205ENST00000427193 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
C9orf3-205ENST00000427193 HEG1Q9ULI3 1381 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 ARFGEF1Q9Y6D6 1849 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 CHL1O00533 1208 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 METTL24Q5JXM2 366 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
C9orf3-205ENST00000427193 CRAMP1Q96RY5 1269 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 PDCD2LQ9BRP1 358 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 ENKD1Q9H0I2 346 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 ZSWIM4Q9H7M6 989 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 BABAM1Q9NWV8 329 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 H2AFY2Q9P0M6 372 aaPredicted RBP6.97□□□□□ -1.29
C9orf3-205ENST00000427193 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 FZD1Q9UP38 647 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
C9orf3-205ENST00000427193 MYPNQ86TC9 1320 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 MAPK8IP3Q9UPT6 1336 aa6.97□□□□□ -1.29
C9orf3-205ENST00000427193 C5P01031 1676 aa6.96□□□□□ -1.29
C9orf3-205ENST00000427193 CNTNAP1P78357 1384 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms