RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 SLC9A9Q8IVB4 645 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
PHF1-203ENST00000427004 MICALL1Q8N3F8 863 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 C1orf127Q8N9H9 656 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 SPPL3Q8TCT6 385 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
PHF1-203ENST00000427004 DPP3Q9NY33 737 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 SIX4Q9UIU6 781 aa16.66■□□□□ 0.26
PHF1-203ENST00000427004 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
PHF1-203ENST00000427004 C2CD2LO14523 706 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 ITGB3P05106 788 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 TNNI1P19237 187 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 CA8P35219 290 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 GCLMP48507 274 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 ALDH7A1P49419 539 aaKnown RBP16.65■□□□□ 0.26
PHF1-203ENST00000427004 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
PHF1-203ENST00000427004 STX1AQ16623 288 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 UPP1Q16831 310 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 EDRF1Q3B7T1 1238 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 SPATA1Q5VX52 437 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 ADGRD2Q7Z7M1 963 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 IRF2BP1Q8IU81 584 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 GLYCTKQ8IVS8 523 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 MLKLQ8NB16 471 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 CXorf38Q8TB03 319 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 GOLGA5Q8TBA6 731 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 PARD3BQ8TEW8 1205 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 INTS13Q9NVM9 706 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 MTMR10Q9NXD2 777 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 SPG21Q9NZD8 308 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 KANSL3Q9P2N6 904 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 RWDD2AQ9UIY3 292 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 UBQLN1Q9UMX0 589 aaKnown RBP16.65■□□□□ 0.26
PHF1-203ENST00000427004 PLXNA3P51805 1871 aa16.65■□□□□ 0.26
PHF1-203ENST00000427004 PRRC2BQ5JSZ5 2229 aaKnown RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 CETN3O15182 167 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 HCRTO43612 131 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 IL18RAPO95256 599 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 ALDH2P05091 517 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 KRT19P08727 400 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 TMEM191BP0C7N4 346 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 IGFBP4P22692 258 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
PHF1-203ENST00000427004 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 LRRC63Q05C16 580 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 NFIL3Q16649 462 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 PLPP4Q5VZY2 271 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 C9orf57Q5W0N0 161 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 CDX2Q99626 313 aaPredicted RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 ASB7Q9H672 318 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 PLEKHA5Q9HAU0 1116 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
PHF1-203ENST00000427004 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 FRMD4BQ9Y2L6 1034 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 PCDHB12Q9Y5F1 795 aa16.64■□□□□ 0.25
PHF1-203ENST00000427004 H3BNC9 293 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 TADA2AO75478 443 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 B3GAT3O94766 335 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 VNN1O95497 513 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 RPL17P18621 184 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 PSMC2P35998 433 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 VAMP7P51809 220 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 CCDC85BQ15834 202 aaPredicted RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 KYAT1Q16773 422 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 CCDC40Q4G0X9 1142 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 TIGD5Q53EQ6 642 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 TCERG1LQ5VWI1 586 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 SPOPLQ6IQ16 392 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 FUT10Q6P4F1 479 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 BEST2Q8NFU1 509 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 PPM1EQ8WY54 764 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
PHF1-203ENST00000427004 FNBP1Q96RU3 617 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 TMEM175Q9BSA9 504 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 ADAM28Q9UKQ2 775 aa16.63■□□□□ 0.25
PHF1-203ENST00000427004 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
PHF1-203ENST00000427004 C5orf67F2Z3F1 127 aa16.62■□□□□ 0.25
PHF1-203ENST00000427004 DLL1O00548 723 aa16.62■□□□□ 0.25
PHF1-203ENST00000427004 KIAA0391O15091 583 aaKnown RBP16.62■□□□□ 0.25
PHF1-203ENST00000427004 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
PHF1-203ENST00000427004 BFSP1Q12934 665 aa16.62■□□□□ 0.25
PHF1-203ENST00000427004 PTPN21Q16825 1174 aa16.62■□□□□ 0.25
PHF1-203ENST00000427004 RTP2Q5QGT7 225 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms