RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZDHHC14Q8IZN3 488 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
USP42-203ENST00000426246 ADM5C9JUS6 153 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 DDX3YO15523 660 aaKnown RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 GAS8O95995 478 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 OVGP1Q12889 678 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 SLC13A5Q86YT5 568 aaPredicted RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 KIFAP3Q92845 792 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 SCN4AP35499 1836 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 PHF2O75151 1096 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 CYP11B1P15538 503 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 B3GNT9Q6UX72 402 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 TAOK1Q7L7X3 1001 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 RHOT2Q8IXI1 618 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 KREMEN1Q96MU8 473 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 NSRP1Q9H0G5 558 aaKnown RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 PSMD10O75832 226 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 HMGCS2P54868 508 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 COBLL1Q53SF7 1204 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 ANKRD20A8PQ5CZ79 823 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 CYP4A22Q5TCH4 519 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 DAW1Q8N136 415 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 TMEM130Q8N3G9 435 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 PPP1R13LQ8WUF5 828 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 TGS1Q96RS0 853 aaKnown RBP14.24□□□□□ -0.13
USP42-203ENST00000426246 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 HOMER3Q9NSC5 361 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 ADAM22Q9P0K1 906 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
USP42-203ENST00000426246 MYH11P35749 1972 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 EXOC1LA0A1B0GW35 172 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 P4HBP07237 508 aaKnown RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 IGBP1P78318 339 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 ZBTB16Q05516 673 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 VGLL4Q14135 290 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 EP400NLQ6ZTU2 488 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 THNSL1Q8IYQ7 743 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 EPS8L1Q8TE68 723 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 STAMBPL1Q96FJ0 436 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 TMEM237Q96Q45 408 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 MYCBPQ99417 103 aaPredicted RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 CARD9Q9H257 536 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 PICK1Q9NRD5 415 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 SLC26A4O43511 780 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 CA4P22748 312 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 RARRES1P49788 294 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 NRLP54845 237 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 TFAMQ00059 246 aaKnown RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 CDO1Q16878 200 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 SH3D19Q5HYK7 790 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 SV2AQ7L0J3 742 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 ATG4CQ96DT6 458 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 AS3MTQ9HBK9 375 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 WEE2P0C1S8 567 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 POLGP54098 1239 aaPredicted RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 P3H1Q32P28 736 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 CTAGE3PQ8IX95 158 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 FUKQ8N0W3 1084 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 ZBTB10Q96DT7 871 aa14.23□□□□□ -0.13
USP42-203ENST00000426246 CALR3Q96L12 384 aaKnown RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
USP42-203ENST00000426246 RTN2O75298 545 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 NEBLO76041 1014 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 BYSLQ13895 437 aaKnown RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 MDH1BQ5I0G3 518 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 KRT39Q6A163 491 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 FBXL13Q8NEE6 735 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 RAB20Q9NX57 234 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP42-203ENST00000426246 C19orf81C9J6K1 198 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP42-203ENST00000426246 CHUKO15111 745 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 CHRNA3P32297 505 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 GPS1Q13098 491 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 IZUMO3Q5VZ72 239 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 ZBED8Q8IZ13 594 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 MXRA8Q9BRK3 442 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 ETNK1Q9HBU6 452 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 SLCO1B3Q9NPD5 702 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 SLC12A6Q9UHW9 1150 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 CCT8L1PA6NM43 557 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 H0YGN5 161 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 DIAPH2O60879 1101 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 PRKCIP41743 596 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 NPTX2P47972 431 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms