RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 NCBP1Q09161 790 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ENOX2Q16206 610 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 DCAF4L1Q3SXM0 396 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 PAN2Q504Q3 1202 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 COBLL1Q53SF7 1204 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 RNFT1Q5M7Z0 435 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CENPPQ6IPU0 288 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 KLHL10Q6JEL2 608 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 LRRC55Q6ZSA7 311 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 C11orf57Q6ZUT1 292 aaPredicted RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 STXBP4Q6ZWJ1 553 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 SV2AQ7L0J3 742 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 TDHQ8IZJ6 230 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 GUF1Q8N442 669 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 GSTCDQ8NEC7 633 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 PLEKHO2Q8TD55 490 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 NOC3LQ8WTT2 800 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 NELFBQ8WX92 580 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 POMGNT1Q8WZA1 660 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ZNF689Q96CS4 500 aaPredicted RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 EEF2KMTQ96G04 330 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 GAD1Q99259 594 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 DUSP9Q99956 384 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM213AQ9BRX8 229 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 TRIM6Q9C030 488 aaPredicted RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 GBP3Q9H0R5 595 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ELAC1Q9H777 363 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 TYW1Q9NV66 732 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 DMAC2Q9NW81 257 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 TMEM161AQ9NX61 479 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 HSPBP1Q9NZL4 362 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 PARP2Q9UGN5 583 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CPSF3Q9UKF6 684 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 AGO2Q9UKV8 859 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 LRFN2Q9ULH4 789 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 PLAGL2Q9UPG8 496 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 EXOC7Q9UPT5 735 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 YBX2Q9Y2T7 364 aaKnown RBP6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 PCDHB7Q9Y5E2 793 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 SYCE3A1L190 88 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CDC14CA4D256 554 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ARL5CA6NH57 179 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 TBKBP1A7MCY6 615 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 LACTBL1A8MY62 500 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SOX1O00570 391 aaPredicted RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PDXKO00764 312 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PTGESO14684 152 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 OGTO15294 1046 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 DGKIO75912 1065 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 RECQL4O94761 1208 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 GJB5O95377 273 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 EOMESO95936 686 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 NR3C1P04150 777 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ADRB2P07550 413 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 LINC00271P0C7V0 271 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PTMSP20962 102 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 GARTP22102 1010 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 IGFBP6P24592 240 aaPredicted RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CCNE1P24864 410 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ABCD1P33897 745 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 MLH1P40692 756 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CASP4P49662 377 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 RAB27AP51159 221 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SCNN1GP51170 649 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 GUCY2FP51841 1108 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 HTRA4P83105 476 aaPredicted RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 TYRO3Q06418 890 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SPAG1Q07617 926 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ZSCAN23Q3MJ62 389 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SLFN12LQ6IEE8 588 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 TTI2Q6NXR4 508 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ARMCX5Q6P1M9 558 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ALKAL1Q6UXT8 129 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ZNF280BQ86YH2 543 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CBWD2Q8IUF1 395 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 TRIML1Q8N9V2 468 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PHOSPHO2Q8TCD6 241 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 RABGGTAQ92696 567 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 P2RX5Q93086 422 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 C18orf25Q96B23 403 aaPredicted RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SNX27Q96L92 541 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ZMAT2Q96NC0 199 aaKnown RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC9A7Q96T83 725 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 ADPGKQ9BRR6 497 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 FUCA2Q9BTY2 467 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PBX4Q9BYU1 374 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 GZF1Q9H116 711 aaPredicted RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 MTIF3Q9H2K0 278 aaKnown RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CWH43Q9H720 699 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 RSAD1Q9HA92 442 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 CACNG4Q9UBN1 327 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 TRAF3IP3Q9Y228 551 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 INPP5FQ9Y2H2 1132 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms