RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PPP2R3AQ06190 1150 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 CUL4BQ13620 913 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
SNX3-204ENST00000426155 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 SAAL1Q96ER3 474 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 FBXL18Q96ME1 805 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 ACCSQ96QU6 501 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 RXFP1Q9HBX9 757 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 SLC38A7Q9NVC3 462 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 AGO2Q9UKV8 859 aaKnown RBP14.84□□□□□ -0.03
SNX3-204ENST00000426155 STYXL1Q9Y6J8 313 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 ADAM12O43184 909 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 ADH1AP07327 375 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 NFICP08651 508 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 TKTP29401 623 aaKnown RBP14.83□□□□□ -0.04
SNX3-204ENST00000426155 WNT7BP56706 349 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 PSMD5Q16401 504 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 DCLRE1AQ6PJP8 1040 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 TMC5Q6UXY8 1006 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 PALB2Q86YC2 1186 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 ADHFE1Q8IWW8 467 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 GJD3Q8N144 294 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 LNX1Q8TBB1 728 aaPredicted RBP14.83□□□□□ -0.04
SNX3-204ENST00000426155 POMGNT1Q8WZA1 660 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 SUSD6Q92537 303 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 FAM84AQ96KN4 292 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 UROC1Q96N76 676 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 C7orf25Q9BPX7 421 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 TTPALQ9BTX7 342 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 GOLPH3LQ9H4A5 285 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 RPF1Q9H9Y2 349 aaKnown RBP14.83□□□□□ -0.04
SNX3-204ENST00000426155 MAN1C1Q9NR34 630 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 FAM50BQ9Y247 325 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
SNX3-204ENST00000426155 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 PPEF2O14830 753 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 CMA1P23946 247 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 ABCD1P33897 745 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 HOXD13P35453 343 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 NDUFA8P51970 172 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 CBX2Q14781 532 aaPredicted RBP14.82□□□□□ -0.04
SNX3-204ENST00000426155 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 CRELD2Q6UXH1 353 aaPredicted RBP14.82□□□□□ -0.04
SNX3-204ENST00000426155 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.82□□□□□ -0.04
SNX3-204ENST00000426155 SYCP3Q8IZU3 236 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 PIK3R5Q8WYR1 880 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 DDX27Q96GQ7 796 aaKnown RBP14.82□□□□□ -0.04
SNX3-204ENST00000426155 CLSTN3Q9BQT9 956 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 CBWD1Q9BRT8 395 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 LRRC27Q9C0I9 530 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 PCIF1Q9H4Z3 704 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 PLEKHA5Q9HAU0 1116 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 MAGEF1Q9HAY2 307 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 DZANK1Q9NVP4 752 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 SSX2IPQ9Y2D8 614 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 PCDHB13Q9Y5F0 798 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
SNX3-204ENST00000426155 GOLGA8IPA6NC78 632 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 GOLGA8JA6NMD2 632 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 TULP1O00294 542 aaPredicted RBP14.81□□□□□ -0.04
SNX3-204ENST00000426155 TGM5O43548 720 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 GLUD1P00367 558 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 HOXB8P17481 243 aaPredicted RBP14.81□□□□□ -0.04
SNX3-204ENST00000426155 FGFR3P22607 806 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 AMPD3Q01432 767 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 EHHADHQ08426 723 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 ZBTB6Q15916 424 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 FAM26FQ5R3K3 315 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 SLFN12LQ6IEE8 588 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 RSPO2Q6UXX9 243 aaPredicted RBP14.81□□□□□ -0.04
SNX3-204ENST00000426155 UNC13DQ70J99 1090 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 PPFIBP1Q86W92 1011 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 CEP57L1Q8IYX8 460 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 NOC3LQ8WTT2 800 aaKnown RBP14.81□□□□□ -0.04
SNX3-204ENST00000426155 PAGE5Q96GU1 130 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 RPGRIP1Q96KN7 1286 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 FAM213AQ9BRX8 229 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 SCAND2PQ9GZW5 306 aaPredicted RBP14.81□□□□□ -0.04
SNX3-204ENST00000426155 ADAM7Q9H2U9 754 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 POMKQ9H5K3 350 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 FNIP2Q9P278 1114 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 EXOC7Q9UPT5 735 aa14.81□□□□□ -0.04
SNX3-204ENST00000426155 KLRC4O43908 158 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 RFPL2O75678 378 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 ADRB2P07550 413 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 SLFN14P0C7P3 912 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 MCM4P33991 863 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 ELAVL2Q12926 359 aaKnown RBP14.8□□□□□ -0.04
SNX3-204ENST00000426155 ALCAMQ13740 583 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 KYAT1Q16773 422 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 EPM2AIP1Q7L775 607 aaPredicted RBP14.8□□□□□ -0.04
SNX3-204ENST00000426155 NELFCDQ8IXH7 590 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 EFCAB13Q8IY85 973 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 SFXN1Q9H9B4 322 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 SLC39A2Q9NP94 309 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.8□□□□□ -0.04
SNX3-204ENST00000426155 PRKAG3Q9UGI9 489 aa14.8□□□□□ -0.04
SNX3-204ENST00000426155 UBQLN1Q9UMX0 589 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms