RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NOCTQ9UK39 431 aaKnown RBP18.66■□□□□ 0.58
FN1-208ENST00000426059 GRIN2DO15399 1336 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 CHRNB2P17787 502 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 CUL2Q13617 745 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 SURF1Q15526 300 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 MAP3K21Q5TCX8 1036 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 KLHDC9Q8NEP7 349 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 ANKRD36BP1Q96IX9 119 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 PCDHB18PQ96TA0 734 aa18.66■□□□□ 0.58
FN1-208ENST00000426059 PIN4Q9Y237 131 aaKnown RBP18.66■□□□□ 0.58
FN1-208ENST00000426059 THSD7BQ9C0I4 1608 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 CYP11B1P15538 503 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 ABCB4P21439 1286 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 CDC42EP1Q00587 391 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 TRPC3Q13507 836 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 CCSAPQ6IQ19 270 aaPredicted RBP18.65■□□□□ 0.58
FN1-208ENST00000426059 APOL6Q9BWW8 343 aa18.65■□□□□ 0.58
FN1-208ENST00000426059 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
FN1-208ENST00000426059 DDX20Q9UHI6 824 aaKnown RBP18.65■□□□□ 0.58
FN1-208ENST00000426059 IL18RAPO95256 599 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 ASS1P00966 412 aaKnown RBP18.64■□□□□ 0.58
FN1-208ENST00000426059 TNNC2P02585 160 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.58
FN1-208ENST00000426059 GALCP54803 685 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 SLC27A1Q6PCB7 646 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 SCARA5Q6ZMJ2 495 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 C1orf127Q8N9H9 656 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 IMPG2Q9BZV3 1241 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 NXF3Q9H4D5 531 aaKnown RBP18.64■□□□□ 0.58
FN1-208ENST00000426059 SIX4Q9UIU6 781 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.58
FN1-208ENST00000426059 SRGAP2O75044 1071 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 INHAP05111 366 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 AP3M2P53677 418 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 TERF1P54274 439 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 NCBP1Q09161 790 aaKnown RBP18.64■□□□□ 0.57
FN1-208ENST00000426059 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 TMEM270Q6UE05 265 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 CARD6Q9BX69 1037 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.57
FN1-208ENST00000426059 FKTNO75072 461 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 MYCP01106 439 aaPredicted RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 ITGB3P05106 788 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 H2AFZP0C0S5 128 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 CD58P19256 250 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 ACO1P21399 889 aaKnown RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 AKAP5P24588 427 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 CRYBB1P53674 252 aaPredicted RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 H2AFVQ71UI9 128 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 CELF4Q9BZC1 486 aaKnown RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 NOC2LQ9Y3T9 749 aaKnown RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 PCDHB4Q9Y5E5 795 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 CDY2AQ9Y6F7 541 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 TACC1O75410 805 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 PDE6CP51160 858 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 FMO1Q01740 532 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 PTPROQ16827 1216 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 ENOSF1Q7L5Y1 443 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 TRIM6Q9C030 488 aaPredicted RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 GOLPH3Q9H4A6 298 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 NXF1Q9UBU9 619 aaKnown RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 CHORDC1Q9UHD1 332 aaPredicted RBP18.63■□□□□ 0.57
FN1-208ENST00000426059 POLIQ9UNA4 740 aa18.63■□□□□ 0.57
FN1-208ENST00000426059 NCK2O43639 380 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 SLU7O95391 586 aaKnown RBP18.62■□□□□ 0.57
FN1-208ENST00000426059 WEE2P0C1S8 567 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 ANXA13P27216 316 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 NKX3-2P78367 333 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 ZNF699Q32M78 642 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 ZNF394Q53GI3 561 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 C10orf76Q5T2E6 689 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 TAF2Q6P1X5 1199 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 NME8Q8N427 588 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 DDX1Q92499 740 aaKnown RBP18.62■□□□□ 0.57
FN1-208ENST00000426059 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 PALMO75781 387 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 GRM5P41594 1212 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 NOP2P46087 812 aaKnown RBP18.62■□□□□ 0.57
FN1-208ENST00000426059 MRPS6P82932 125 aaKnown RBP18.62■□□□□ 0.57
FN1-208ENST00000426059 SGSM1Q2NKQ1 1148 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 GLRA4Q5JXX5 417 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 FAM228AQ86W67 206 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 TRIM58Q8NG06 486 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 ERO1AQ96HE7 468 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 PSMB7Q99436 277 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 CCDC94Q9BW85 323 aaPredicted RBP18.62■□□□□ 0.57
FN1-208ENST00000426059 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
FN1-208ENST00000426059 CFHP08603 1231 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.57
FN1-208ENST00000426059 TMEM132DQ14C87 1099 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 DCAF4L1Q3SXM0 396 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 TXLNBQ8N3L3 684 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 PXYLP1Q8TE99 480 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 ARHGEF26Q96DR7 871 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms