RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 BCAR1P56945 870 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 DCLRE1AQ6PJP8 1040 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 KCNT2Q6UVM3 1135 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 EFCAB13Q8IY85 973 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 COLGALT1Q8NBJ5 622 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 FAM200AQ8TCP9 573 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 CNOT6LQ96LI5 555 aaKnown RBP26.04■■□□□ 1.76
APOE-202ENST00000425718 ZNF560Q96MR9 790 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 ARHGEF37A1IGU5 675 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 TMEM189-UBE2V1I3L0A0 370 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 DDHD2O94830 711 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 GALTP07902 379 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 BMPR1AP36894 532 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 OR1G1P47890 313 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 ERVK-21P61565 698 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 CETN1Q12798 172 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 TCERG1LQ5VWI1 586 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 ZNF280BQ86YH2 543 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 AOPEPQ8N6M6 819 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 EEF2KMTQ96G04 330 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 MED15Q96RN5 788 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 C11orf84Q9BUA3 381 aaPredicted RBP26.03■■□□□ 1.76
APOE-202ENST00000425718 NKX2-4Q9H2Z4 354 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 SPG21Q9NZD8 308 aa26.03■■□□□ 1.76
APOE-202ENST00000425718 YBX2Q9Y2T7 364 aaKnown RBP26.03■■□□□ 1.76
APOE-202ENST00000425718 LCHNA4D1U4 455 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 LRRIQ3A6PVS8 624 aaPredicted RBP26.02■■□□□ 1.76
APOE-202ENST00000425718 C5orf67F2Z3F1 127 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 TRAPPC3O43617 180 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 CTNNB1P35222 781 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 MTIF2P46199 727 aaKnown RBP26.02■■□□□ 1.76
APOE-202ENST00000425718 RBP5P82980 135 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 KRT17Q04695 432 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 ELAVL2Q12926 359 aaKnown RBP26.02■■□□□ 1.76
APOE-202ENST00000425718 DCAF17Q5H9S7 520 aaPredicted RBP26.02■■□□□ 1.76
APOE-202ENST00000425718 TMEM169Q96HH4 297 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 MTMR12Q9C0I1 747 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 TMEM8AQ9HCN3 771 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.02■■□□□ 1.76
APOE-202ENST00000425718 SCN1AP35498 2009 aa26.02■■□□□ 1.76
APOE-202ENST00000425718 CASTOR2A6NHX0 329 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 GOLGA6L19H0YKK7 550 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 PODXLO00592 558 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 PHACTR2O75167 634 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 MYOGP15173 224 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 PBX2P40425 430 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 TAP1Q03518 808 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 BMS1Q14692 1282 aaKnown RBP26.01■■□□□ 1.75
APOE-202ENST00000425718 UPP1Q16831 310 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 TRIM59Q8IWR1 403 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 C18orf25Q96B23 403 aaPredicted RBP26.01■■□□□ 1.75
APOE-202ENST00000425718 TUBGCP4Q9UGJ1 667 aa26.01■■□□□ 1.75
APOE-202ENST00000425718 NRP1O14786 923 aa26■■□□□ 1.75
APOE-202ENST00000425718 P4HA2O15460 535 aa26■■□□□ 1.75
APOE-202ENST00000425718 CDK11BP21127 795 aaKnown RBP26■■□□□ 1.75
APOE-202ENST00000425718 SLC11A1P49279 550 aa26■■□□□ 1.75
APOE-202ENST00000425718 UBE3AQ05086 875 aa26■■□□□ 1.75
APOE-202ENST00000425718 MYO1EQ12965 1108 aa26■■□□□ 1.75
APOE-202ENST00000425718 BIRC3Q13489 604 aa26■■□□□ 1.75
APOE-202ENST00000425718 TRPC3Q13507 836 aa26■■□□□ 1.75
APOE-202ENST00000425718 KRT39Q6A163 491 aa26■■□□□ 1.75
APOE-202ENST00000425718 GPR153Q6NV75 609 aa26■■□□□ 1.75
APOE-202ENST00000425718 TRAPPC11Q7Z392 1133 aa26■■□□□ 1.75
APOE-202ENST00000425718 CREBRFQ8IUR6 639 aa26■■□□□ 1.75
APOE-202ENST00000425718 LRRC52Q8N7C0 313 aa26■■□□□ 1.75
APOE-202ENST00000425718 CCDC150Q8NCX0 1101 aa26■■□□□ 1.75
APOE-202ENST00000425718 CXCL16Q9H2A7 254 aa26■■□□□ 1.75
APOE-202ENST00000425718 DNAJB4Q9UDY4 337 aa26■■□□□ 1.75
APOE-202ENST00000425718 PUF60Q9UHX1 559 aaKnown RBP26■■□□□ 1.75
APOE-202ENST00000425718 ANO9A1A5B4 782 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 KCNJ18B7U540 433 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 PMM2O15305 246 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 MXI1P50539 228 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 CLCNKBP51801 687 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 WNT7BP56706 349 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 PLCB3Q01970 1234 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 SOX4Q06945 474 aaPredicted RBP25.99■■□□□ 1.75
APOE-202ENST00000425718 KCNJ12Q14500 433 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 MAN2A1Q16706 1144 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 ZACNQ401N2 412 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 TCP11X2Q5H9J9 407 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 CDKAL1Q5VV42 579 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 C9orf57Q5W0N0 161 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 SLC39A11Q8N1S5 342 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 FBXO22Q8NEZ5 403 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 SLC35C1Q96A29 364 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 IGSF21Q96ID5 467 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 IMPG2Q9BZV3 1241 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 ADAM28Q9UKQ2 775 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 LZTS1Q9Y250 596 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 NUB1Q9Y5A7 615 aa25.99■■□□□ 1.75
APOE-202ENST00000425718 SF3B1O75533 1304 aaKnown RBP eCLIP25.98■■□□□ 1.75
APOE-202ENST00000425718 PIRO00625 290 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 TADA2AO75478 443 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 B3GAT3O94766 335 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 C4BPAP04003 597 aaKnown RBP25.98■■□□□ 1.75
APOE-202ENST00000425718 ATICP31939 592 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 SV2CQ496J9 727 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 EPC2Q52LR7 807 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 DHX40Q8IX18 779 aaKnown RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms