RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 GKAP1Q5VSY0 366 aaPredicted RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 HHATQ5VTY9 493 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 CCDC137Q6PK04 289 aaKnown RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 MICAL1Q8TDZ2 1067 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 EPS8L1Q8TE68 723 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 DDX23Q9BUQ8 820 aaKnown RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 RASAL2Q9UJF2 1139 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 TPX2Q9ULW0 747 aaKnown RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PFASO15067 1338 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 RBM47A0AV96 593 aaKnown RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 MIF4GDA9UHW6 222 aaKnown RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 CLUL1Q15846 466 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 ATG4AQ8WYN0 398 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 FNBP1Q96RU3 617 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 TRIM7Q9C029 511 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 TMEM8AQ9HCN3 771 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 JPH1Q9HDC5 661 aaPredicted RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 RAB20Q9NX57 234 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 ACSL3O95573 720 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 TNNI1P19237 187 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 RPS12P25398 132 aaKnown RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 LIG4P49917 911 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 PPP1R7Q15435 360 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 GNPTABQ3T906 1256 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 C3orf20Q8ND61 904 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 TAS1R2Q8TE23 839 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 CD101Q93033 1021 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 KREMEN1Q96MU8 473 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 CHCHD3Q9NX63 227 aaKnown RBP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL12A1-205ENST00000425443 SLC9A2Q9UBY0 812 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
COL12A1-205ENST00000425443 MAPK13O15264 365 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 CLDN3O15551 220 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 RARAP10276 462 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 GHRHRQ02643 423 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 DHX34Q14147 1143 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 LRRC14Q15048 493 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PARP9Q8IXQ6 854 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 MCPH1Q8NEM0 835 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 BSNDQ8WZ55 320 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PGM2Q96G03 612 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 HERPUD2Q9BSE4 406 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 POLGP54098 1239 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 EIF3BP55884 814 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 STRN3Q13033 797 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 DRP2Q13474 957 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ZFYVE27Q5T4F4 411 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 FAM71AQ8IYT1 594 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 RDM1Q8NG50 284 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF564Q8TBZ8 553 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 NOCTQ9UK39 431 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ENO4A6NNW6 628 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 RGS16O15492 202 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 RIPK2O43353 540 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF862O60290 1169 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 DGAT1O75907 488 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 CYP11B1P15538 503 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 TGFB2P61812 414 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PRKCEQ02156 737 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 AUHQ13825 339 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 NEDD9Q14511 834 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PIGWQ7Z7B1 504 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 GPD1LQ8N335 351 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 CDHR1Q96JP9 859 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PWWP2AQ96N64 755 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 HEMGNQ9BXL5 484 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ACTR5Q9H9F9 607 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 ATP6V0A4Q9HBG4 840 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 C1orf112Q9NSG2 853 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 CTNNAL1Q9UBT7 734 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 PCYOX1Q9UHG3 505 aa13.84□□□□□ -0.19
COL12A1-205ENST00000425443 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-205ENST00000425443 EIF4E1BA6NMX2 242 aaKnown RBP13.83□□□□□ -0.2
COL12A1-205ENST00000425443 PTPRAP18433 802 aa13.83□□□□□ -0.2
COL12A1-205ENST00000425443 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
COL12A1-205ENST00000425443 WDR44Q5JSH3 913 aa13.83□□□□□ -0.2
COL12A1-205ENST00000425443 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
COL12A1-205ENST00000425443 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.2
COL12A1-205ENST00000425443 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
COL12A1-205ENST00000425443 SV2AQ7L0J3 742 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms