RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TADA2BQ86TJ2 420 aa11.42□□□□□ -0.58
CUX1-205ENST00000425244 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
CUX1-205ENST00000425244 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
CUX1-205ENST00000425244 A0A087WUV0 522 aaPredicted RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 AOC2O75106 756 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 SHBGP04278 402 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 MARK3P27448 753 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 SFNP31947 248 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 KCNJ1P48048 391 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 DHX34Q14147 1143 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 TTC27Q6P3X3 843 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 MAP4K3Q8IVH8 894 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 CCDC105Q8IYK2 499 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 ZDHHC14Q8IZN3 488 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 C1orf131Q8NDD1 294 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 MYCBPAPQ8TBZ2 947 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 SHC3Q92529 594 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 TATDN2Q93075 761 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 ST6GALNAC4Q9H4F1 302 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 KIAA0391O15091 583 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 PPFIA2O75334 1257 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 TOMM70O94826 608 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 TXNP10599 105 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 EDNRBP24530 442 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 PMS2P54278 862 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 PPP2R2AP63151 447 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 CRHR2Q13324 411 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 RNF187Q5TA31 235 aaPredicted RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 CCDC137Q6PK04 289 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 SHCBP1Q8NEM2 672 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 PLCD4Q9BRC7 762 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 TIPINQ9BVW5 301 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 TMEM8AQ9HCN3 771 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 ANKEF1Q9NU02 776 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 ZDHHC18Q9NUE0 388 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 RAB20Q9NX57 234 aa11.41□□□□□ -0.58
CUX1-205ENST00000425244 CNOT8Q9UFF9 292 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
CUX1-205ENST00000425244 FAM155AB1AL88 458 aaPredicted RBP11.4□□□□□ -0.58
CUX1-205ENST00000425244 NOP56O00567 594 aaKnown RBP11.4□□□□□ -0.58
CUX1-205ENST00000425244 ZNF862O60290 1169 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 PSAPP07602 524 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CHRNA3P32297 505 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 RPL21P46778 160 aaKnown RBP11.4□□□□□ -0.58
CUX1-205ENST00000425244 PEX5P50542 639 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 HADHBP55084 474 aaKnown RBP11.4□□□□□ -0.58
CUX1-205ENST00000425244 HTRA3P83110 453 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 SATB1Q01826 763 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CDR2Q01850 454 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 C2CD6Q53TS8 623 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 DENND2CQ68D51 928 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 SLC39A4Q6P5W5 647 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 PLEKHH3Q7Z736 793 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CCDC25Q86WR0 208 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 RPS6KC1Q96S38 1066 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 MORF4L1Q9UBU8 362 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 MAPK13O15264 365 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CAND2O75155 1236 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
CUX1-205ENST00000425244 GZMAP12544 262 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 PTGIRP43119 386 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CLUL1Q15846 466 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 EMC10Q5UCC4 262 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 MIS18BP1Q6P0N0 1132 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 ZDHHC24Q6UX98 284 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 OTUD6AQ7L8S5 288 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 OTUD6BQ8N6M0 293 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 SLC17A8Q8NDX2 589 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 MDM1Q8TC05 714 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 KIFAP3Q92845 792 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 WNT8AQ9H1J5 351 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
CUX1-205ENST00000425244 CLDN3O15551 220 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 STRNO43815 780 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 HSPA6P17066 643 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 CYP2B6P20813 491 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 FGFR4P22455 802 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 SNRPFP62306 86 aaKnown RBP11.39□□□□□ -0.59
CUX1-205ENST00000425244 PRKCEQ02156 737 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 CYP24A1Q07973 514 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 SNX1Q13596 522 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 UBAP2Q5T6F2 1119 aaKnown RBP11.39□□□□□ -0.59
CUX1-205ENST00000425244 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 SLC13A5Q86YT5 568 aaPredicted RBP11.39□□□□□ -0.59
CUX1-205ENST00000425244 ATP6V0A1Q93050 837 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 SLC12A6Q9UHW9 1150 aa11.39□□□□□ -0.59
CUX1-205ENST00000425244 GTF3C4Q9UKN8 822 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms