RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 DDX12PQ92771 950 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 SMOC2Q9H3U7 446 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 ST6GALNAC4Q9H4F1 302 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 BACE2Q9Y5Z0 518 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 CLUHO75153 1309 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 A0A087X0B3 334 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 A0A0B4J269 797 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 MYMKA6NI61 221 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 PLA2G5P39877 138 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 TXLNAP40222 546 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 ANKS3Q6ZW76 656 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 DNAJC19Q96DA6 116 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 PIDD1Q9HB75 910 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 TUBGCP4Q9UGJ1 667 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 CDY1Q9Y6F8 540 aa23.48■■□□□ 1.35
CDCP1-202ENST00000425231 OGTO15294 1046 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 ADRB2P07550 413 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 ABCD1P33897 745 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 SPAG1Q07617 926 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 KYAT1Q16773 422 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 SV2BQ7L1I2 683 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 ZNF720Q7Z2F6 126 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 TMEM130Q8N3G9 435 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 STAMQ92783 540 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 PANK2Q9BZ23 570 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 MYH15Q9Y2K3 1946 aa23.47■■□□□ 1.35
CDCP1-202ENST00000425231 DOCK6Q96HP0 2047 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 LACTBL1A8MY62 500 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 ANKRD63C9JTQ0 380 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 TBC1D4O60343 1298 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 C8AP07357 584 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 ENOX2Q16206 610 aaKnown RBP23.46■■□□□ 1.35
CDCP1-202ENST00000425231 CCDC73Q6ZRK6 1079 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 SFR1Q86XK3 245 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 MYADMQ96S97 322 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 STRA6Q9BX79 667 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 TFIP11Q9UBB9 837 aaKnown RBP23.46■■□□□ 1.35
CDCP1-202ENST00000425231 NUB1Q9Y5A7 615 aa23.46■■□□□ 1.35
CDCP1-202ENST00000425231 SYN3O14994 580 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 PPP1R37O75864 691 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 HNRNPA1P09651 372 aaKnown RBP eCLIP23.45■■□□□ 1.34
CDCP1-202ENST00000425231 LRPAP1P30533 357 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 HOXA9P31269 272 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 MRPL58Q14197 206 aaKnown RBP23.45■■□□□ 1.34
CDCP1-202ENST00000425231 VARS2Q5ST30 1063 aaKnown RBP23.45■■□□□ 1.34
CDCP1-202ENST00000425231 AXDND1Q5T1B0 1012 aaPredicted RBP23.45■■□□□ 1.34
CDCP1-202ENST00000425231 LIN9Q5TKA1 542 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 SLC8B1Q6J4K2 584 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 HSCBQ8IWL3 235 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 FBXL6Q8N531 539 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 FAM122AQ96E09 287 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 KIF12Q96FN5 646 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 SUSD3Q96L08 255 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 MSTO1Q9BUK6 570 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 KCNK12Q9HB15 430 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 CPSF3Q9UKF6 684 aaKnown RBP23.45■■□□□ 1.34
CDCP1-202ENST00000425231 STYXL1Q9Y6J8 313 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 DOCK8Q8NF50 2099 aa23.45■■□□□ 1.34
CDCP1-202ENST00000425231 GBP2P32456 591 aaPredicted RBP23.44■■□□□ 1.34
CDCP1-202ENST00000425231 PPP2R3AQ06190 1150 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 STK38Q15208 465 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 UVSSAQ2YD98 709 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 PPM1LQ5SGD2 360 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 KCNH6Q9H252 994 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 IKZF4Q9H2S9 585 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 RPF1Q9H9Y2 349 aaKnown RBP23.44■■□□□ 1.34
CDCP1-202ENST00000425231 EPS15L1Q9UBC2 864 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 SEL1LQ9UBV2 794 aa23.44■■□□□ 1.34
CDCP1-202ENST00000425231 UBQLN1Q9UMX0 589 aaKnown RBP23.44■■□□□ 1.34
CDCP1-202ENST00000425231 TISP43B9A030 160 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 SPTLC2O15270 562 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 PPP6R2O75170 966 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 CYP3A5P20815 502 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 STAT6P42226 847 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 ZNF461Q8TAF7 563 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 SLC7A14Q8TBB6 771 aa23.43■■□□□ 1.34
CDCP1-202ENST00000425231 ZNF396Q96N95 335 aaPredicted RBP23.43■■□□□ 1.34
CDCP1-202ENST00000425231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDCP1-202ENST00000425231 ABLIM3O94929 683 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 PDGFBP01127 241 aaPredicted RBP23.42■■□□□ 1.34
CDCP1-202ENST00000425231 PDIA4P13667 645 aaKnown RBP23.42■■□□□ 1.34
CDCP1-202ENST00000425231 MCM4P33991 863 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 ROR1Q01973 937 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 TDGQ13569 410 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 RTL10Q7L3V2 364 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 GRASPQ7Z6J2 395 aaPredicted RBP23.42■■□□□ 1.34
CDCP1-202ENST00000425231 HVCN1Q96D96 273 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 TSPAN18Q96SJ8 248 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 IGSF9Q9P2J2 1179 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.42■■□□□ 1.34
CDCP1-202ENST00000425231 MUC6Q6W4X9 2439 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 ZDBF2Q9HCK1 2354 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 CCL16O15467 120 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 POU2F2P09086 479 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 GAP43P17677 238 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 NTHL1P78549 312 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 KCNA1Q09470 495 aa23.42■■□□□ 1.34
CDCP1-202ENST00000425231 FOXD4L5Q5VV16 416 aaPredicted RBP23.42■■□□□ 1.34
CDCP1-202ENST00000425231 SLFN12LQ6IEE8 588 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms