RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 TRPV2Q9Y5S1 764 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 CHRNA1P02708 482 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 CXCL8P10145 99 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 CKAP4Q07065 602 aaKnown RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 FBXL13Q8NEE6 735 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 TAS1R2Q8TE23 839 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 DEF6Q9H4E7 631 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 RPF1Q9H9Y2 349 aaKnown RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 AJAP1Q9UKB5 411 aaPredicted RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 NPTXRO95502 500 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 ATP1A1P05023 1023 aaKnown RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 PLEKP08567 350 aaPredicted RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 HGSNATQ68CP4 663 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 IQCEQ6IPM2 695 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 RPAINQ86UA6 219 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 APEX2Q9UBZ4 518 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 COQ4Q9Y3A0 265 aa16.16■□□□□ 0.18
CALD1-206ENST00000424922 NOC2LQ9Y3T9 749 aaKnown RBP16.16■□□□□ 0.18
CALD1-206ENST00000424922 AKR1B10O60218 316 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 TACC1O75410 805 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 C4BPAP04003 597 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 SERPING1P05155 500 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 CLTAP09496 248 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 PLA2G4AP47712 749 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 PTK7Q13308 1070 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 BIRC3Q13489 604 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 SFMBT2Q5VUG0 894 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 TDRD10Q5VZ19 366 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 SLC27A1Q6PCB7 646 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 C15orf39Q6ZRI6 1047 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 OR5B17Q8NGF7 314 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 EIF2AQ9BY44 585 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 SENP6Q9GZR1 1112 aaPredicted RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 TRPV6Q9H1D0 765 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 FBXL5Q9UKA1 691 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 RALGAPA2Q2PPJ7 1873 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 DNM1LO00429 736 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 ERLIN1O75477 346 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 RPLP2P05387 115 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 PRLRP16471 622 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 AXLP30530 894 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 DCAF4L1Q3SXM0 396 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 ZACNQ401N2 412 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 DHX38Q92620 1227 aaKnown RBP16.15■□□□□ 0.18
CALD1-206ENST00000424922 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 DNAJC12Q9UKB3 198 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 TFR2Q9UP52 801 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 JRKLQ9Y4A0 524 aa16.15■□□□□ 0.18
CALD1-206ENST00000424922 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.18
CALD1-206ENST00000424922 SEC31AO94979 1220 aaKnown RBP16.14■□□□□ 0.17
CALD1-206ENST00000424922 MGAT3Q09327 533 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 SURF1Q15526 300 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.17
CALD1-206ENST00000424922 CTU1Q7Z7A3 348 aaKnown RBP16.14■□□□□ 0.17
CALD1-206ENST00000424922 WDR49Q8IV35 697 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 ELMO3Q96BJ8 720 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
CALD1-206ENST00000424922 LACTBL1A8MY62 500 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 ARVCFO00192 962 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 B4GALT4O60513 344 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 IL18RAPO95256 599 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 MAGEA1P43355 309 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 ARID5AQ03989 594 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 KYAT1Q16773 422 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 LONRF2Q1L5Z9 754 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 WDR93Q6P2C0 686 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 ARHGEF19Q8IW93 802 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 RNF10Q8N5U6 811 aaKnown RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 ACAP3Q96P50 834 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 PI4K2AQ9BTU6 479 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 FUT8Q9BYC5 575 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 MTMR12Q9C0I1 747 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 UBE2TQ9NPD8 197 aaPredicted RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 LUC7LQ9NQ29 371 aaKnown RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 KIAA0100Q14667 2235 aaKnown RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 ENC1O14682 589 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 VNN1O95497 513 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 HLA-DRAP01903 254 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 PIK3CAP42336 1068 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 LBX1P52954 281 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 JAM2P57087 298 aa16.13■□□□□ 0.17
CALD1-206ENST00000424922 TFAMQ00059 246 aaKnown RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
CALD1-206ENST00000424922 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms