RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MICAL1Q8TDZ2 1067 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 CKAP2Q8WWK9 683 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 LPAR1Q92633 364 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 TMEM237Q96Q45 408 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 PAIP2Q9BPZ3 127 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 STMN4Q9H169 189 aaPredicted RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 ARL2BPQ9Y2Y0 163 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 GJB6O95452 261 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 CFBP00751 764 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 GAP43P17677 238 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 FOXN2P32314 431 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 MOXD1Q6UVY6 613 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ASRGL1Q7L266 308 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
MSH5-206ENST00000423982 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 FAM20AQ96MK3 541 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
MSH5-206ENST00000423982 ADAM33Q9BZ11 813 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 PRKAG3Q9UGI9 489 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 FEM1BQ9UK73 627 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 TBX3O15119 743 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ABL2P42684 1182 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ZNF131P52739 623 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 C2CD6Q53TS8 623 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ANKRD20A2Q5SQ80 823 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ANKRD20A1Q5TYW2 823 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 ANKRD20A3Q5VUR7 823 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 LLGL2Q6P1M3 1020 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 OTOP1Q7RTM1 612 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 CBWD1Q9BRT8 395 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 MKNK1Q9BUB5 465 aa15.29■□□□□ 0.04
MSH5-206ENST00000423982 CTDP1Q9Y5B0 961 aaPredicted RBP15.29■□□□□ 0.04
MSH5-206ENST00000423982 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 HSPA6P17066 643 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 STX2P32856 288 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 ITGA8P53708 1063 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 HADHBP55084 474 aaKnown RBP15.28■□□□□ 0.04
MSH5-206ENST00000423982 SGO2Q562F6 1265 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 RXFP1Q9HBX9 757 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
MSH5-206ENST00000423982 WDR90Q96KV7 1748 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
MSH5-206ENST00000423982 CCND1P24385 295 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 GCKP35557 465 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 EPC2Q52LR7 807 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 CYFIP1Q7L576 1253 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 LDHDQ86WU2 507 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 ZNF653Q96CK0 615 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 C9orf72Q96LT7 481 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 RUNDC3BQ96NL0 473 aa15.28■□□□□ 0.04
MSH5-206ENST00000423982 SLC26A4O43511 780 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 BCRP11274 1271 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
MSH5-206ENST00000423982 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 TMEM63BQ5T3F8 832 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 RHBDF2Q6PJF5 856 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 TRMT10CQ7L0Y3 403 aaKnown RBP15.27■□□□□ 0.04
MSH5-206ENST00000423982 FMNL3Q8IVF7 1028 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 SERPINB12Q96P63 405 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 RPS6KC1Q96S38 1066 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 ROPN1BQ9BZX4 212 aaPredicted RBP15.27■□□□□ 0.04
MSH5-206ENST00000423982 WNT8AQ9H1J5 351 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 KIF9Q9HAQ2 790 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 ROPN1Q9HAT0 212 aaPredicted RBP15.27■□□□□ 0.04
MSH5-206ENST00000423982 OTOFQ9HC10 1997 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
MSH5-206ENST00000423982 BRCA2P51587 3418 aa15.27■□□□□ 0.04
MSH5-206ENST00000423982 GOLGA8IPA6NC78 632 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 GOLGA8JA6NMD2 632 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 THAP12O43422 761 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 SPAG7O75391 227 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 TTC4O95801 387 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 IVDP26440 423 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 DAW1Q8N136 415 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 PPM1KQ8N3J5 372 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 KREMEN1Q96MU8 473 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 NINJ2Q9NZG7 142 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.03
MSH5-206ENST00000423982 SYNPO2Q9UMS6 1093 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 NAALADL1Q9UQQ1 740 aa15.27■□□□□ 0.03
MSH5-206ENST00000423982 ZNFX1Q9P2E3 1918 aaKnown RBP15.26■□□□□ 0.03
MSH5-206ENST00000423982 DDX39AO00148 427 aaKnown RBP15.26■□□□□ 0.03
MSH5-206ENST00000423982 O00370 1275 aa15.26■□□□□ 0.03
MSH5-206ENST00000423982 MYBL1P10243 752 aa15.26■□□□□ 0.03
MSH5-206ENST00000423982 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
MSH5-206ENST00000423982 TARSP26639 723 aaKnown RBP15.26■□□□□ 0.03
MSH5-206ENST00000423982 HP1BP3Q5SSJ5 553 aaPredicted RBP15.26■□□□□ 0.03
MSH5-206ENST00000423982 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
MSH5-206ENST00000423982 PSPC1Q8WXF1 523 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms