RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 P4HA1P13674 534 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 PNPLA4P41247 253 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 RABGGTBP53611 331 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 RBP5P82980 135 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 KCNJ12Q14500 433 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 GLRA4Q5JXX5 417 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 ZBTB41Q5SVQ8 909 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 PPP2R2DQ66LE6 453 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 DCLRE1AQ6PJP8 1040 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 TMCO2Q7Z6W1 182 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-209ENST00000422933 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
HDLBP-209ENST00000422933 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 TMEM169Q96HH4 297 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 ZNF560Q96MR9 790 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 PPP1R10Q96QC0 940 aaKnown RBP10.78□□□□□ -0.68
HDLBP-209ENST00000422933 TGS1Q96RS0 853 aaKnown RBP10.78□□□□□ -0.68
HDLBP-209ENST00000422933 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 INTS13Q9NVM9 706 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
HDLBP-209ENST00000422933 ANK1P16157 1881 aa10.78□□□□□ -0.68
HDLBP-209ENST00000422933 PTGESO14684 152 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 LPXNO60711 386 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 AFPP02771 609 aaKnown RBP10.77□□□□□ -0.69
HDLBP-209ENST00000422933 RB1P06400 928 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 TPM3P06753 285 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
HDLBP-209ENST00000422933 CTNNB1P35222 781 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 GATMP50440 423 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 MARSP56192 900 aaKnown RBP10.77□□□□□ -0.69
HDLBP-209ENST00000422933 BCAR1P56945 870 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 ELAVL2Q12926 359 aaKnown RBP10.77□□□□□ -0.69
HDLBP-209ENST00000422933 WDR44Q5JSH3 913 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 FKBP15Q5T1M5 1219 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 KRT39Q6A163 491 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 LRRC55Q6ZSA7 311 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-209ENST00000422933 TIFAQ96CG3 184 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 FUCA2Q9BTY2 467 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 NRDE2Q9H7Z3 1164 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 MMRN2Q9H8L6 949 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 FANCLQ9NW38 375 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 SPG21Q9NZD8 308 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 PTPRSQ13332 1948 aa10.77□□□□□ -0.69
HDLBP-209ENST00000422933 GBF1Q92538 1859 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 CASTOR2A6NHX0 329 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 LRRIQ3A6PVS8 624 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-209ENST00000422933 GRXCR1A8MXD5 290 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 PODXLO00592 558 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 P4HA2O15460 535 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 B3GAT3O94766 335 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 SERPINC1P01008 464 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 CA3P07451 260 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 NFICP08651 508 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 DNAJB2P25686 324 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 ATICP31939 592 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 BMPR1AP36894 532 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 PIK3CAP42336 1068 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TAF6P49848 677 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 MXI1P50539 228 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 MAN2A1Q16706 1144 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 SV2CQ496J9 727 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 KIAA1841Q6NSI8 718 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TRAPPC11Q7Z392 1133 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 ZSWIM2Q8NEG5 633 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TAF4BQ92750 862 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 FAM161BQ96MY7 647 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 ZMAT2Q96NC0 199 aaKnown RBP10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TUBGCP2Q9BSJ2 902 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 C11orf84Q9BUA3 381 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-209ENST00000422933 PBX4Q9BYU1 374 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 MTMR12Q9C0I1 747 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TMEM8AQ9HCN3 771 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 SAMSN1Q9NSI8 373 aaKnown RBP10.76□□□□□ -0.69
HDLBP-209ENST00000422933 MIOSQ9NXC5 875 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 AGAP1Q9UPQ3 857 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 SSX2IPQ9Y2D8 614 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 MRPL42Q9Y6G3 142 aaKnown RBP10.76□□□□□ -0.69
HDLBP-209ENST00000422933 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
HDLBP-209ENST00000422933 TMEM265A0A087WTH1 108 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 LINC01553A4QN01 128 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 NRP1O14786 923 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 DDHD2O94830 711 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 ITGB3P05106 788 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 GALTP07902 379 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 LRPAP1P30533 357 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 GCLMP48507 274 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 CLCNKBP51801 687 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 CLDN10P78369 228 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 DSC1Q08554 894 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 KCNH2Q12809 1159 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 ZBTB6Q15916 424 aa10.75□□□□□ -0.69
HDLBP-209ENST00000422933 SGSM1Q2NKQ1 1148 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms