RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 RPN1P04843 607 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 ADH1AP07327 375 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 NFICP08651 508 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 IL9P15248 144 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 KCNE1P15382 129 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 EPCAMP16422 314 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 RPL17P18621 184 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 CYP2J2P51589 502 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 PNOCQ13519 176 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 NAB2Q15742 525 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 PSMD5Q16401 504 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 UPP1Q16831 310 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 ZSCAN23Q3MJ62 389 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 KMT5BQ4FZB7 885 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 DCLRE1AQ6PJP8 1040 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 ALKAL1Q6UXT8 129 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 HS2ST1Q7LGA3 356 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 TMEM130Q8N3G9 435 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 BEST2Q8NFU1 509 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 VN1R2Q8NFZ6 395 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 CASP10Q92851 521 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 ERCC4Q92889 916 aaPredicted RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 NECAB3Q96P71 396 aaPredicted RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 CBWD1Q9BRT8 395 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 TTPALQ9BTX7 342 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 PLEKHA5Q9HAU0 1116 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 CPSF3Q9UKF6 684 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 UBQLN1Q9UMX0 589 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 SPTBN5Q9NRC6 3674 aaKnown RBP10.5□□□□□ -0.73
HERC3-204ENST00000422770 UBE4BO95155 1302 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 REV3LO60673 3130 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 C2orf16Q68DN1 1984 aa10.5□□□□□ -0.73
HERC3-204ENST00000422770 BRWD1Q9NSI6 2320 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 SYCE3A1L190 88 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 MEFVO15553 781 aaPredicted RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 IL18RAPO95256 599 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 LDHAP00338 332 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 CNPP09543 421 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 SPATA31D3P0C874 917 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 GARTP22102 1010 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 TKTP29401 623 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 ADSSP30520 456 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 RPL9P32969 192 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 LTBRP36941 435 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 ARPP19P56211 112 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 TFAMQ00059 246 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 DSG1Q02413 1049 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 CREMQ03060 361 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 CTC1Q2NKJ3 1217 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 RTP2Q5QGT7 225 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 RARS2Q5T160 578 aaKnown RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 CNNM4Q6P4Q7 775 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 SPATA31D4Q6ZUB0 917 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 PPFIBP1Q86W92 1011 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 CD302Q8IX05 232 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 GPD1LQ8N335 351 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 C3orf58Q8NDZ4 430 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 ZSWIM2Q8NEG5 633 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 KCNN1Q92952 543 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 TIGD1Q96MW7 591 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 KLHL5Q96PQ7 755 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 UHRF1Q96T88 793 aaPredicted RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 STRA6Q9BX79 667 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 RBAKQ9NYW8 714 aaPredicted RBP10.49□□□□□ -0.73
HERC3-204ENST00000422770 TTC28Q96AY4 2481 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 TSC2P49815 1807 aa10.49□□□□□ -0.73
HERC3-204ENST00000422770 SCN1AP35498 2009 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 BIN1O00499 593 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 TEX28O15482 410 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 EXTL3O43909 919 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 FAM189A1O60320 539 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 GLUD1P00367 558 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 MYL1P05976 194 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 KRT19P08727 400 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 WEE2P0C1S8 567 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 TMEM191BP0C7N4 346 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 IGFBP6P24592 240 aaPredicted RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 SMAD4Q13485 552 aaKnown RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 CES5AQ6NT32 575 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 ANKRD54Q6NXT1 300 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 KANK3Q6NY19 840 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 DSTYKQ6XUX3 929 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
HERC3-204ENST00000422770 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 SMARCE1Q969G3 411 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
HERC3-204ENST00000422770 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms