RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SLC35F1Q5T1Q4 408 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 LARP4Q71RC2 724 aaKnown RBP eCLIP6.13□□□□□ -1.43
SFXN1-202ENST00000421887 MIGA2Q7L4E1 593 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 GLCCI1Q86VQ1 547 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 GPR135Q8IZ08 494 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 ANAPC16Q96DE5 110 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 UHRF1Q96T88 793 aaPredicted RBP6.13□□□□□ -1.43
SFXN1-202ENST00000421887 ZDHHC5Q9C0B5 715 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 IGSF5Q9NSI5 407 aa6.13□□□□□ -1.43
SFXN1-202ENST00000421887 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 MASP2O00187 686 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 PFASO15067 1338 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 HOXB7P09629 217 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 IL1R1P14778 569 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 PPP2R1AP30153 589 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 GJA4P35212 333 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 ADRA1BP35368 520 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 SMAD3P84022 425 aaKnown RBP6.12□□□□□ -1.43
SFXN1-202ENST00000421887 AOX1Q06278 1338 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 CHRNDQ07001 517 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 NEXNQ0ZGT2 675 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 SPTY2D1Q68D10 685 aaPredicted RBP6.12□□□□□ -1.43
SFXN1-202ENST00000421887 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
SFXN1-202ENST00000421887 GADL1Q6ZQY3 521 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 KCTD1Q719H9 257 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 ADGRE4PQ86SQ3 457 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 ANKRD13CQ8N6S4 541 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 PPM1EQ8WY54 764 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 TTC28Q96AY4 2481 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 ASB2Q96Q27 587 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 GPR27Q9NS67 375 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 THEGQ9P2T0 379 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 CDC42EP3Q9UKI2 254 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 OGDHLQ9ULD0 1010 aa6.12□□□□□ -1.43
SFXN1-202ENST00000421887 TCF20Q9UGU0 1960 aaKnown RBP6.11□□□□□ -1.43
SFXN1-202ENST00000421887 CXCL11O14625 94 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 TAF5LO75529 589 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 PEX11BO96011 259 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 MRPS5P82675 430 aaKnown RBP6.11□□□□□ -1.43
SFXN1-202ENST00000421887 SHHQ15465 462 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 LRRC26Q2I0M4 334 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 KRT24Q2M2I5 525 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 ZKSCAN2Q63HK3 967 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 USP53Q70EK8 1073 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 OR14K1Q8NGZ2 314 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 TEKT1Q969V4 418 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 PHF20Q9BVI0 1012 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 SENP6Q9GZR1 1112 aaPredicted RBP6.11□□□□□ -1.43
SFXN1-202ENST00000421887 TTYH1Q9H313 450 aaPredicted RBP6.11□□□□□ -1.43
SFXN1-202ENST00000421887 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 NRDE2Q9H7Z3 1164 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 MSL2Q9HCI7 577 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 ARHGAP28Q9P2N2 729 aa6.11□□□□□ -1.43
SFXN1-202ENST00000421887 MUC3AQ02505 3323 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 PRUNE2Q8WUY3 3088 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 SPTBN5Q9NRC6 3674 aaKnown RBP6.1□□□□□ -1.43
SFXN1-202ENST00000421887 ANKRD18BA2A2Z9 1011 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 FRAT2O75474 233 aaPredicted RBP6.1□□□□□ -1.43
SFXN1-202ENST00000421887 TCF3P15923 654 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 GRK2P25098 689 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 GRK3P35626 688 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 CACNB3P54284 484 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 DBPQ10586 325 aaPredicted RBP6.1□□□□□ -1.43
SFXN1-202ENST00000421887 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 C15orf52Q6ZUT6 534 aaKnown RBP6.1□□□□□ -1.43
SFXN1-202ENST00000421887 FILIP1Q7Z7B0 1213 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 VPS37DQ86XT2 251 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 CCAR1Q8IX12 1150 aaKnown RBP6.1□□□□□ -1.43
SFXN1-202ENST00000421887 KCTD13Q8WZ19 329 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 PLEKHF1Q96S99 279 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 GPRC5BQ9NZH0 403 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 ZNHIT2Q9UHR6 403 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 SLC45A1Q9Y2W3 748 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 LTBP2Q14767 1821 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 MAST2Q6P0Q8 1798 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 MYO9BQ13459 2157 aa6.1□□□□□ -1.43
SFXN1-202ENST00000421887 PTPRFP10586 1907 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 B2RBV5 119 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 PLIN1O60240 522 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 SUSD5O60279 629 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 CYP2B6P20813 491 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 GRIA2P42262 883 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 EPHA5P54756 1037 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 SLC25A3Q00325 362 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 PCOLCEQ15113 449 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 TMEM31Q5JXX7 168 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 OTOP2Q7RTS6 562 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 UBE3BQ7Z3V4 1068 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 USP38Q8NB14 1042 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 SHCBP1Q8NEM2 672 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 LRFN3Q9BTN0 628 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 CHMP4AQ9BY43 222 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 CD244Q9BZW8 370 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 MAP3K2Q9Y2U5 619 aa6.09□□□□□ -1.43
SFXN1-202ENST00000421887 ZHX2Q9Y6X8 837 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms