RNA–Protein interactions for RNA: ENST00000421773.1

AFF4-204, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-204ENST00000421773 CCL15Q16663 113 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SLC35F1Q5T1Q4 408 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 RESP18Q5W5W9 173 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SNRNP48Q6IEG0 339 aaKnown RBP7.49□□□□□ -1.21
AFF4-204ENST00000421773 RGMBQ6NW40 437 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SHC4Q6S5L8 630 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 CPXCR1Q8N123 301 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 FAM43AQ8N2R8 423 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 MFSD2AQ8NA29 543 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SHCBP1Q8NEM2 672 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 CHST13Q8NET6 341 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SYTL5Q8TDW5 730 aaPredicted RBP7.49□□□□□ -1.21
AFF4-204ENST00000421773 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 FERMT2Q96AC1 680 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 KREMEN1Q96MU8 473 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 SPATC1LQ9H0A9 340 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 PIDD1Q9HB75 910 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 KCNMB3Q9NPA1 279 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 CRTAC1Q9NQ79 661 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 RNF146Q9NTX7 359 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 OBP2AQ9NY56 170 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 LUC7L2Q9Y383 392 aaKnown RBP7.49□□□□□ -1.21
AFF4-204ENST00000421773 PCDHA9Q9Y5H5 950 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 ASTN1O14525 1302 aa7.49□□□□□ -1.21
AFF4-204ENST00000421773 MANSC4A6NHS7 340 aaPredicted RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 M0R082 166 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 PDHXO00330 501 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 IGF2BP3O00425 579 aaKnown RBP eCLIP7.48□□□□□ -1.21
AFF4-204ENST00000421773 SH3BP5O60239 455 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 PEX10O60683 326 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 GAS7O60861 476 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 SNUPNO95149 360 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 FKBP9O95302 570 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 TDP2O95551 362 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 F2P00734 622 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 CFBP00751 764 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 ALAS1P13196 640 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 CMA1P23946 247 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 MARCKSP29966 332 aaPredicted RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 MCM7P33993 719 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 COPB2P35606 906 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 RPS6P62753 249 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 PURAQ00577 322 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 Q4G0T1 1027 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 SLC30A10Q6XR72 485 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 SLCO4C1Q6ZQN7 724 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 FKBP9P1Q75LS8 142 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 ETNPPLQ8TBG4 499 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 HAS1Q92839 578 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 ISL2Q96A47 359 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 NAP1L4Q99733 375 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 ARPC5LQ9BPX5 153 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 MOV10L1Q9BXT6 1211 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 R3HDMLQ9H3Y0 253 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 NOL6Q9H6R4 1146 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 ACAD9Q9H845 621 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 A1CFQ9NQ94 594 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 ENAMQ9NRM1 1142 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 ZKSCAN5Q9Y2L8 839 aa7.48□□□□□ -1.21
AFF4-204ENST00000421773 MYH9P35579 1960 aaKnown RBP7.48□□□□□ -1.21
AFF4-204ENST00000421773 RASSF10A6NK89 507 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 VSTM5A8MXK1 200 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 FAM86B1E9PN63 330 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 CBX4O00257 560 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 TBX3O15119 743 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 NEMFO60524 1076 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 SLC25A27O95847 323 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 FAM86B2P0C5J1 330 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 OR52Z1P0C646 297 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 MYBL2P10244 700 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 CYP2C8P10632 490 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 BCRP11274 1271 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 PAX3P23760 479 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 ME1P48163 572 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 TM4SF4P48230 202 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 GCLCP48506 637 aaPredicted RBP7.47□□□□□ -1.21
AFF4-204ENST00000421773 AMPD2Q01433 879 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 DUOXA2Q1HG44 320 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 LETM2Q2VYF4 491 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 ATP13A4Q4VNC1 1196 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 RNF207Q6ZRF8 634 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 RBM43Q6ZSC3 357 aaKnown RBP7.47□□□□□ -1.21
AFF4-204ENST00000421773 NIPA1Q7RTP0 329 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 UBE3DQ7Z6J8 389 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 NXPE1Q8N323 547 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 FIBCD1Q8N539 461 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 IGSF22Q8N9C0 903 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 MRPS27Q92552 414 aaKnown RBP7.47□□□□□ -1.21
AFF4-204ENST00000421773 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 CLIC6Q96NY7 704 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 PDCD2LQ9BRP1 358 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
AFF4-204ENST00000421773 CYP4F12Q9HCS2 524 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms