RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 MAN2A1Q16706 1144 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 DUOXA2Q1HG44 320 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 MIIPQ5JXC2 388 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 TDRD10Q5VZ19 366 aaKnown RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 APTXQ7Z2E3 356 aaKnown RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 NT5DC4Q86YG4 428 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 C1orf127Q8N9H9 656 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 RABGGTAQ92696 567 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 PAAF1Q9BRP4 392 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 VPS16Q9H269 839 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 SLC38A7Q9NVC3 462 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 LIMA1Q9UHB6 759 aaKnown RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 PLXNA4Q9HCM2 1894 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 TRIOBPQ9H2D6 2365 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.315e-6■□□□□ 9.7
DDX55-203ENST00000421670 TNNC2P02585 160 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 ITGB3P05106 788 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 MYOGP15173 224 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 MXI1P50539 228 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 DSC1Q08554 894 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 TUSC3Q13454 348 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 BIRC3Q13489 604 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 CMTR2Q8IYT2 770 aaKnown RBP16.98■□□□□ 0.31
DDX55-203ENST00000421670 ANKRD20A12PQ8NF67 263 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 BEST2Q8NFU1 509 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 RAD9AQ99638 391 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 DPP3Q9NY33 737 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 INSL6Q9Y581 213 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 TSC2P49815 1807 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 PPEF2O14830 753 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 XPOTO43592 962 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 AFPP02771 609 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 PBX3P40426 434 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 FMO5P49326 533 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 COPB1P53618 953 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 CACTINQ8WUQ7 758 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 RSPH1Q8WYR4 309 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 FAM193BQ96PV7 902 aaPredicted RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 TSPAN18Q96SJ8 248 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 NRDE2Q9H7Z3 1164 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 SIX4Q9UIU6 781 aa16.97■□□□□ 0.31
DDX55-203ENST00000421670 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
DDX55-203ENST00000421670 SZT2Q5T011 3432 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 F8W810 466 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 STX10O60499 249 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 KRT19P08727 400 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 CYP3A5P20815 502 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
DDX55-203ENST00000421670 CLCNKBP51801 687 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 MYL7Q01449 175 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 ZACNQ401N2 412 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 KRT39Q6A163 491 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 COLGALT2Q8IYK4 626 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 CWH43Q9H720 699 aa16.96■□□□□ 0.31
DDX55-203ENST00000421670 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 PHACTR2O75167 634 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 VNN1O95497 513 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 SERPINC1P01008 464 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 GTF2H1P32780 548 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 PBX2P40425 430 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 OR1G1P47890 313 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 AP3M2P53677 418 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 FANCCQ00597 558 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 SPOUT1Q5T280 376 aaKnown RBP16.95■□□□□ 0.3
DDX55-203ENST00000421670 C9orf57Q5W0N0 161 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 FIBCD1Q8N539 461 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 CXorf38Q8TB03 319 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 SP7Q8TDD2 431 aaPredicted RBP16.95■□□□□ 0.3
DDX55-203ENST00000421670 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 ELMO3Q96BJ8 720 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX55-203ENST00000421670 ITGA11Q9UKX5 1188 aa16.95■□□□□ 0.3
DDX55-203ENST00000421670 PRG3Q9Y2Y8 225 aaPredicted RBP16.95■□□□□ 0.3
DDX55-203ENST00000421670 PODXLO00592 558 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 LRRN2O75325 713 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 ARHGEF15O94989 841 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 CST3P01034 146 aaPredicted RBP16.94■□□□□ 0.3
DDX55-203ENST00000421670 TPM2P07951 284 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 IGFBP6P24592 240 aaPredicted RBP16.94■□□□□ 0.3
DDX55-203ENST00000421670 PIK3CAP42336 1068 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 UPP1Q16831 310 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 HASPINQ8TF76 798 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 AGAP1Q9UPQ3 857 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 ANO9A1A5B4 782 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 LRRC10BA6NIK2 292 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 LGALS16A8MUM7 142 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms