RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 UVSSAQ2YD98 709 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF484Q5JVG2 852 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 JAKMIP3Q5VZ66 844 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 PMS2CLQ68D20 193 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-212ENST00000421523 SWSAP1Q6NVH7 229 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 Q6ZUG5 572 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ARMCX6Q7L4S7 300 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 PLA2G4DQ86XP0 818 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 RNF168Q8IYW5 571 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF710Q8N1W2 664 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 SPRYD3Q8NCJ5 442 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 OR2I1PQ8NGU4 316 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 NLRP7Q8WX94 980 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 RSPH1Q8WYR4 309 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 MBOAT7Q96N66 472 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 TMEM175Q9BSA9 504 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 APOL6Q9BWW8 343 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 NUSAP1Q9BXS6 441 aaKnown RBP6.3□□□□□ -1.4
HDAC8-212ENST00000421523 SEMA4CQ9C0C4 833 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF302Q9NR11 478 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.3□□□□□ -1.4
HDAC8-212ENST00000421523 FAM105AQ9NUU6 356 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
HDAC8-212ENST00000421523 SNX14Q9Y5W7 946 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 ITPR2Q14571 2701 aa6.3□□□□□ -1.4
HDAC8-212ENST00000421523 TSC2P49815 1807 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 PTPRBP23467 1997 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 THADAQ6YHU6 1953 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 NCANO14594 1321 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ADAMTS9Q9P2N4 1935 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ATG2BQ96BY7 2078 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ZFHX3Q15911 3703 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 CCDC196A0A1B0GTZ2 297 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TRABD2BA6NFA1 517 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 B8ZZF3 427 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 DDX39AO00148 427 aaKnown RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ARNTLO00327 626 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 IFNAR1P17181 557 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 BCKDHBP21953 392 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 RPS6KB1P23443 525 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 HOXA9P31269 272 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 CREMQ03060 361 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TOB2Q14106 344 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TARBP2Q15633 366 aaKnown RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 USP41Q3LFD5 358 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 RTP2Q5QGT7 225 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 PDXDC2PQ6P474 469 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 GPR155Q7Z3F1 870 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 FMNL3Q8IVF7 1028 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 YAF2Q8IY57 180 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 CKAP2LQ8IYA6 745 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 SMAP1Q8IYB5 467 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 RABGGTAQ92696 567 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 BRF1Q92994 677 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TCEAL4Q96EI5 215 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ASB16Q96NS5 453 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF577Q9BSK1 485 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 RNF26Q9BY78 433 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TRPV5Q9NQA5 729 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 CHST7Q9NS84 486 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 TBC1D22BQ9NU19 505 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 PCDHB9Q9Y5E1 797 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 PCDHA10Q9Y5I2 948 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 GOLGA4Q13439 2230 aaKnown RBP6.29□□□□□ -1.4
HDAC8-212ENST00000421523 VWA8A3KMH1 1905 aa6.29□□□□□ -1.4
HDAC8-212ENST00000421523 KIF26AQ9ULI4 1882 aaPredicted RBP6.28□□□□□ -1.4
HDAC8-212ENST00000421523 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 CYP3A7-CYP3A51PA0A087WV96 503 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 IGKV6-21A0A0C4DH24 114 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 TEX51A0A1B0GUA7 166 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 WDR27A2RRH5 827 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 FAM149AA5PLN7 773 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 UPK3BL1B0FP48 263 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 UPK3BL2E5RIL1 263 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 MSH4O15457 936 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 ADAM12O43184 909 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
HDAC8-212ENST00000421523 SH3BP5O60239 455 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 OPHN1O60890 802 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 PSMD10O75832 226 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 EFEMP2O95967 443 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 C1RP00736 705 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 SKIP12755 728 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 CYP3A7P24462 503 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 GNA11P29992 359 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 EIF2S3P41091 472 aaKnown RBP6.28□□□□□ -1.4
HDAC8-212ENST00000421523 CCR10P46092 362 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 GPC3P51654 580 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 USP11P51784 963 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 CXADRP78310 365 aa6.28□□□□□ -1.4
HDAC8-212ENST00000421523 SETQ01105 290 aaPredicted RBP6.28□□□□□ -1.4
HDAC8-212ENST00000421523 LY6DQ14210 128 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms