RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CA14Q9ULX7 337 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 POLIQ9UNA4 740 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 MYO15AQ9UKN7 3530 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 CFAP54Q96N23 3096 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 FANCMQ8IYD8 2048 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 H0YCG3 227 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 STK25O00506 426 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 PLA2G4BP0C869 781 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 MAPTP10636 758 aaKnown RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 RFX1P22670 979 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 ROR1Q01973 937 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 RAD51AP2Q09MP3 1159 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 TMEM119Q4V9L6 283 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 PABPC1LQ4VXU2 614 aaKnown RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 VARS2Q5ST30 1063 aaKnown RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 FGF14Q92915 247 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 ZBTB45Q96K62 511 aaPredicted RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 TBC1D17Q9HA65 648 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 LARSQ9P2J5 1176 aaKnown RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 ANKFY1Q9P2R3 1169 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 NUB1Q9Y5A7 615 aa18.98■□□□□ 0.63
MSH6-203ENST00000420813 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.98■□□□□ 0.63
MSH6-203ENST00000420813 ARHGEF37A1IGU5 675 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 H7C4K7 107 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 MEFVO15553 781 aaPredicted RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 TBC1D4O60343 1298 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 ABLIM3O94929 683 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 CD2BP2O95400 341 aaKnown RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 HARSP12081 509 aaKnown RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 SCP2P22307 547 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 MCL1Q07820 350 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 MRPL58Q14197 206 aaKnown RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 ANGPT1Q15389 498 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 SLC10A6Q3KNW5 377 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 PARM1Q6UWI2 310 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 ITFG1Q8TB96 612 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 AVENQ9NQS1 362 aaPredicted RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 DNMT3BQ9UBC3 853 aaKnown RBP18.97■□□□□ 0.63
MSH6-203ENST00000420813 ODF2LQ9ULJ1 636 aa18.97■□□□□ 0.63
MSH6-203ENST00000420813 PRR23AA6NEV1 266 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 CLDN3O15551 220 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 NCKAP1LP55160 1127 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 NPAS3Q8IXF0 933 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 C18orf25Q96B23 403 aaPredicted RBP18.96■□□□□ 0.63
MSH6-203ENST00000420813 SUSD3Q96L08 255 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 PLIN2Q99541 437 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 RPP25Q9BUL9 199 aaKnown RBP18.96■□□□□ 0.63
MSH6-203ENST00000420813 PLEKHA5Q9HAU0 1116 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 HCFC1R1Q9NWW0 138 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 SMC3Q9UQE7 1217 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.96■□□□□ 0.63
MSH6-203ENST00000420813 CACNA1IQ9P0X4 2223 aa18.96■□□□□ 0.63
MSH6-203ENST00000420813 WDR27A2RRH5 827 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 BMP15O95972 392 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 ATF2P15336 505 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 ELF1P32519 619 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 ARSHQ5FYA8 562 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 ASCL5Q7RTU5 278 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 TCEAL8Q8IYN2 117 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 NKD2Q969F2 451 aaPredicted RBP18.95■□□□□ 0.62
MSH6-203ENST00000420813 CALML4Q96GE6 196 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 SHDQ96IW2 340 aa18.95■□□□□ 0.62
MSH6-203ENST00000420813 MRPS23Q9Y3D9 190 aaKnown RBP18.95■□□□□ 0.62
MSH6-203ENST00000420813 ANK1P16157 1881 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 PRRG1O14668 218 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 LRG1P02750 347 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 RHOP08100 348 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 CLTAP09496 248 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 MCM4P33991 863 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 UBA7P41226 1012 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 STARD6P59095 220 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 GPC5P78333 572 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 KYAT1Q16773 422 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 TPGS2Q68CL5 300 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 ZNF280DQ6N043 979 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 HAUS6Q7Z4H7 955 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 APPL2Q8NEU8 664 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 GDE1Q9NZC3 331 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 FBXL5Q9UKA1 691 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 SIT1Q9Y3P8 196 aa18.94■□□□□ 0.62
MSH6-203ENST00000420813 PATJQ8NI35 1801 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 NPHP3-ACAD11A0A0J9YXS1 232 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 TTC26A0AVF1 554 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 CXCL8P10145 99 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 PTPN2P17706 415 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 LRPAP1P30533 357 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 PFKPQ01813 784 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
MSH6-203ENST00000420813 CTXN3Q4LDR2 81 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 SEZ6Q53EL9 994 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 LARP1BQ659C4 914 aaKnown RBP18.93■□□□□ 0.62
MSH6-203ENST00000420813 BRAPQ7Z569 592 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 ST13P5Q8NFI4 369 aaPredicted RBP18.93■□□□□ 0.62
MSH6-203ENST00000420813 DDX12PQ92771 950 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 BICD1Q96G01 975 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 REEP2Q9BRK0 252 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 DLGAP2Q9P1A6 1054 aa18.93■□□□□ 0.62
MSH6-203ENST00000420813 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms