RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CCER2I3L3R5 266 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 DCLK1O15075 740 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TSPAN1O60635 241 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 ABCB7O75027 752 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 ABLIM3O94929 683 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 ENGP17813 658 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 ELF1P32519 619 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 CIITAP33076 1130 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 HOXD12P35452 270 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 GRSF1Q12849 480 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 USP39Q53GS9 565 aaKnown RBP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TMEM196Q5HYL7 178 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TYW1BQ6NUM6 668 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TMTC3Q6ZXV5 915 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 SYT13Q7L8C5 426 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TMTC2Q8N394 836 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 HDDC3Q8N4P3 179 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 HASPINQ8TF76 798 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 PSPC1Q8WXF1 523 aaKnown RBP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 RABGGTAQ92696 567 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 HHIPQ96QV1 700 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 PAAF1Q9BRP4 392 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TRIM6Q9C030 488 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 NXF3Q9H4D5 531 aaKnown RBP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 GTSE1Q9NYZ3 720 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 MAFFQ9ULX9 164 aa10.03□□□□□ -0.8
TRIM39-206ENST00000420746 hCG_1642624A0A1W2PR95 340 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 PRRG1O14668 218 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 TRDMT1O14717 391 aaKnown RBP10.02□□□□□ -0.81
TRIM39-206ENST00000420746 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 CAPN9O14815 690 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 ASAP2O43150 1006 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 ABCG1P45844 678 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 MAPK8P45983 427 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 ANTXR2P58335 489 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 FAM193AP78312 1265 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 ROR1Q01973 937 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 SLC23A3Q6PIS1 610 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
TRIM39-206ENST00000420746 SLC7A3Q8WY07 619 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 LENG9Q96B70 501 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 ASAH2Q9NR71 780 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 TPCN1Q9ULQ1 816 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 INSL5Q9Y5Q6 135 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 NUP205Q92621 2012 aa10.02□□□□□ -0.81
TRIM39-206ENST00000420746 VWA8A3KMH1 1905 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 USP9XQ93008 2570 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-206ENST00000420746 SMCO2A6NFE2 343 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 GAS7O60861 476 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 RNF40O75150 1001 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 NTRK1P04629 796 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 CYP21A2P08686 494 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 SRGAP2CP0DJJ0 459 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 AKAP5P24588 427 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 TEAD2Q15562 447 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 MAPK6Q16659 721 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 ITPRIPL2Q3MIP1 535 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 PRR16Q569H4 304 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-206ENST00000420746 TPGS2Q68CL5 300 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 FSTL4Q6MZW2 842 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-206ENST00000420746 SYT12Q8IV01 421 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 RNF149Q8NC42 400 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 PRPF31Q8WWY3 499 aaKnown RBP10.01□□□□□ -0.81
TRIM39-206ENST00000420746 PIGKQ92643 395 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 ACDQ96AP0 544 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 ZNF512Q96ME7 567 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-206ENST00000420746 SLITRK6Q9H5Y7 841 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 CACNG4Q9UBN1 327 aa10.01□□□□□ -0.81
TRIM39-206ENST00000420746 URB1O60287 2271 aaKnown RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 TMEM150BA6NC51 233 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 TRAPPC3O43617 180 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 OPHN1O60890 802 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 THP07101 528 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 FTH1P19P0C7X4 201 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 DRD1P21728 446 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 WEE1P30291 646 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 RFC5P40937 340 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 DHPSP49366 369 aaPredicted RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 ATXN3P54252 364 aaPredicted RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 PTENP60484 403 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 AMPD2Q01433 879 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 POU5F1BQ06416 359 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 SRSF1Q07955 248 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM39-206ENST00000420746 SLC14A1Q13336 389 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 TRIP6Q15654 476 aaKnown RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 SPDYCQ5MJ68 293 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 SLC27A1Q6PCB7 646 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 ANO5Q75V66 913 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 RASSF3Q86WH2 238 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 MB21D2Q8IYB1 491 aaPredicted RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 SHKBP1Q8TBC3 707 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 EXOC4Q96A65 974 aa10□□□□□ -0.81
TRIM39-206ENST00000420746 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
TRIM39-206ENST00000420746 CRELD1Q96HD1 420 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms