RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 BEST2Q8NFU1 509 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 CXXC1Q9P0U4 656 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 H0YGN5 161 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 PHACTR2O75167 634 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 LRRN2O75325 713 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 PBX1P40424 430 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 MYL7Q01449 175 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 CETN1Q12798 172 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 GRIK3Q13003 919 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 BIRC3Q13489 604 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 RASIP1Q5U651 963 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
TMEM53-206ENST00000420706 FBXL13Q8NEE6 735 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 URGCPQ8TCY9 931 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 TAS1R2Q8TE23 839 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 SEMA4DQ92854 862 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
TMEM53-206ENST00000420706 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 SLC38A7Q9NVC3 462 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 SIX4Q9UIU6 781 aa13.48□□□□□ -0.25
TMEM53-206ENST00000420706 TDRD15B5MCY1 1934 aaKnown RBP13.47□□□□□ -0.25
TMEM53-206ENST00000420706 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 FNDC1Q4ZHG4 1894 aaPredicted RBP13.47□□□□□ -0.25
TMEM53-206ENST00000420706 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 TBKBP1A7MCY6 615 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 DDHD2O94830 711 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 ADCY5O95622 1261 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 HLA-DRAP01903 254 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 ITGB3P05106 788 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 TPM3P06753 285 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 SLC9A1P19634 815 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 PON1P27169 355 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 LRPAP1P30533 357 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 RBP5P82980 135 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 TRPC3Q13507 836 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 DPY19L2P1Q6NXN4 242 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 ZNF280BQ86YH2 543 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 ABI1Q8IZP0 508 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 PHOSPHO2Q8TCD6 241 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 RSPH1Q8WYR4 309 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 GDF15Q99988 308 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
TMEM53-206ENST00000420706 GOLGA2P5Q9HBQ8 144 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 ITGA11Q9UKX5 1188 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 SIK3Q9Y2K2 1263 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
TMEM53-206ENST00000420706 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
TMEM53-206ENST00000420706 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
TMEM53-206ENST00000420706 ANO9A1A5B4 782 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 PIRO00625 290 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 KRT19P08727 400 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.25
TMEM53-206ENST00000420706 KLK7P49862 253 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 MYL6P60660 151 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 DSC1Q08554 894 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 TUSC3Q13454 348 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 NCOA4Q13772 614 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 SYCP1Q15431 976 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 MTIF3Q9H2K0 278 aaKnown RBP13.46□□□□□ -0.25
TMEM53-206ENST00000420706 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.25
TMEM53-206ENST00000420706 PPEF2O14830 753 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 B4GALT3O60512 393 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 GJB5O95377 273 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 ATICP31939 592 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 CLCNKBP51801 687 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 HTRA4P83105 476 aaPredicted RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 RNASELQ05823 741 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 SHHQ15465 462 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 SGSM1Q2NKQ1 1148 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 PAN2Q504Q3 1202 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 VSTM4Q8IW00 320 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 TATDN2Q93075 761 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 FAM193BQ96PV7 902 aaPredicted RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 MRPL9Q9BYD2 267 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms