RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ABLIM1O14639 778 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 LILRB5O75023 590 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 ECI2O75521 394 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 KRT37O76014 449 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 POU2F2P09086 479 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
LINC00339-203ENST00000420503 TDGF1P13385 188 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 RPA1P27694 616 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 VIPR2P41587 438 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 ZNF528Q3MIS6 628 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 DCAF4L1Q3SXM0 396 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 WDR44Q5JSH3 913 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 ZBTB45Q96K62 511 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-203ENST00000420503 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
LINC00339-203ENST00000420503 PRMT8Q9NR22 394 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-203ENST00000420503 FBXO4Q9UKT5 387 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 DCDC2BA2VCK2 349 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ABLIM3O94929 683 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
LINC00339-203ENST00000420503 CDR1P51861 262 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ATXN1P54253 815 aaKnown RBP14.14□□□□□ -0.15
LINC00339-203ENST00000420503 DMWDQ09019 674 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 VITQ6UXI7 678 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 OSBPL6Q9BZF3 934 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 EPC1Q9H2F5 836 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 CYP4F11Q9HBI6 524 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 PTPRHQ9HD43 1115 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 C2orf42Q9NWW7 574 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 ZSCAN32Q9NX65 697 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 CEP72Q9P209 647 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 FBXL5Q9UKA1 691 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 INSL5Q9Y5Q6 135 aa14.14□□□□□ -0.15
LINC00339-203ENST00000420503 E9PMD0 336 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 PRRG1O14668 218 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 SPTLC1O15269 473 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 VNN2O95498 520 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 OR4Q2P0C623 313 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 CDC25AP30304 524 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 CCT6AP40227 531 aaKnown RBP14.13□□□□□ -0.15
LINC00339-203ENST00000420503 GRM5P41594 1212 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 NPTX2P47972 431 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 PEX3P56589 373 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 PFKPQ01813 784 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 SPAG1Q07617 926 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 MAPK7Q13164 816 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 SRSF5Q13243 272 aaKnown RBP14.13□□□□□ -0.15
LINC00339-203ENST00000420503 GAS6Q14393 721 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 ZNF568Q3ZCX4 644 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 XKR4Q5GH76 650 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 PDXDC1Q6P996 788 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 KCNK18Q7Z418 384 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 ZNF461Q8TAF7 563 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 ACO2Q99798 780 aaKnown RBP14.13□□□□□ -0.15
LINC00339-203ENST00000420503 CRISPLD1Q9H336 500 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
LINC00339-203ENST00000420503 TUBGCP4Q9UGJ1 667 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 KIAA1024Q9UPX6 916 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 TNFSF13BQ9Y275 285 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 PCDHGA2Q9Y5H1 932 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 CHD8Q9HCK8 2581 aa14.13□□□□□ -0.15
LINC00339-203ENST00000420503 CNOT1A5YKK6 2376 aaKnown RBP14.12□□□□□ -0.15
LINC00339-203ENST00000420503 CCDC169A6NNP5 214 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 HIP1RO75146 1068 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 LRG1P02750 347 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 PTPN2P17706 415 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 SOX9P48436 509 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 NEK4P51957 841 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 ADCY1Q08828 1119 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 TWF1Q12792 350 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 TRIM29Q14134 588 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 MRPL58Q14197 206 aaKnown RBP14.12□□□□□ -0.15
LINC00339-203ENST00000420503 TEAD2Q15562 447 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 IL17AQ16552 155 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 TTC38Q5R3I4 469 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 ZNF852Q6ZMS4 543 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 CCDC83Q8IWF9 413 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 ASB16Q96NS5 453 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 RBM12Q9NTZ6 932 aaKnown RBP14.12□□□□□ -0.15
LINC00339-203ENST00000420503 GDE1Q9NZC3 331 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 USP18Q9UMW8 372 aa14.12□□□□□ -0.15
LINC00339-203ENST00000420503 TIMM13Q9Y5L4 95 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-203ENST00000420503 K7ERI5 159 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 SEC24BO95487 1268 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms