RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 MAN2B1O00754 1011 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 MICAL2O94851 1124 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 XBP1P17861 261 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 CCR3P51677 355 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 CLCNKBP51801 687 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 NRLP54845 237 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 ROR1Q01973 937 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 SPEM2Q0P670 501 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 SCRN1Q12765 414 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 NR5A1Q13285 461 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 GRM2Q14416 872 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 CALCRLQ16602 461 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 MAPK6Q16659 721 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 UPP1Q16831 310 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 ST3GAL2Q16842 350 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 FAM78AQ5JUQ0 283 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 EEF1DP3Q658K8 133 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 ASB16Q96NS5 453 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 TM6SF1Q9BZW5 370 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 C2orf40Q9H1Z8 148 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 TTC12Q9H892 705 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 RAB23Q9ULC3 237 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 F5P12259 2224 aa11.25□□□□□ -0.61
TNFAIP3-202ENST00000420009 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 A0A087WWV3 80 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 I3L4J1 428 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ACKR2O00590 384 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 WNT7AO00755 349 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ABLIM3O94929 683 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRKCBP05771 671 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 RETP07949 1114 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 SPATA31C1P0DKV0 1188 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 PTPN2P17706 415 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 CCR2P41597 374 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 LPAL2Q16609 132 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 DCAF4L1Q3SXM0 396 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 GLRA4Q5JXX5 417 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 VITQ6UXI7 678 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 MAEAQ7L5Y9 396 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZNF461Q8TAF7 563 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 IRF7Q92985 503 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 TCEAL4Q96EI5 215 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 UROC1Q96N76 676 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 MTMR9Q96QG7 549 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 TRMT61BQ9BVS5 477 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 BRD9Q9H8M2 597 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 GOLGA2P5Q9HBQ8 144 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 USP20Q9Y2K6 914 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 GDAQ9Y2T3 454 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 NCANO14594 1321 aa11.24□□□□□ -0.61
TNFAIP3-202ENST00000420009 ARNTLO00327 626 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRRG1O14668 218 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 TRAPPC3O43617 180 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 NEMFO60524 1076 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 DTNBO60941 627 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 LRG1P02750 347 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 CHRNB1P11230 501 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 ATF2P15336 505 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 KRT2P35908 639 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 NAMPTP43490 491 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 BRCC3P46736 316 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 GAS6Q14393 721 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 TCEAL8Q8IYN2 117 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 FAM3CQ92520 227 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 CORO1BQ9BR76 489 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 LMAN1LQ9HAT1 526 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 TUFT1Q9NNX1 390 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 SEMA4GQ9NTN9 838 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 INSL5Q9Y5Q6 135 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
TNFAIP3-202ENST00000420009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZNF197O14709 1029 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 MOSPD3O75425 235 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 PAPSS2O95340 614 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 SEC24AO95486 1093 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 PSMC3P17980 439 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 ATP2B1P20020 1258 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 GDI1P31150 447 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms