RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 HELQQ8TDG4 1101 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 BAG1Q99933 345 aaPredicted RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 TSPYL2Q9H2G4 693 aaPredicted RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 BZW2Q9Y6E2 419 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 ARHGAP6O43182 974 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 PQBP1O60828 265 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 RECQL4O94761 1208 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 PRKCIP41743 596 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 NCOA4Q13772 614 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 TMEM132DQ14C87 1099 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 TRIM60Q495X7 471 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 JADE1Q6IE81 842 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 WDR59Q6PJI9 974 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 SLC24A5Q71RS6 500 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 CCDC170Q8IYT3 715 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 NT5C1BQ96P26 610 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 OSBPL7Q9BZF2 842 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 XYLT2Q9H1B5 865 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 NXF3Q9H4D5 531 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 RNF216Q9NWF9 866 aaPredicted RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 ZNHIT6Q9NWK9 470 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 ZKSCAN5Q9Y2L8 839 aa15.37■□□□□ 0.05
SHMT1P1-201ENST00000419974 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 SSU72P8A0A1W2PR75 194 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 C9IYK1 514 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 NBNO60934 754 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 CCDC172P0C7W6 258 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 SKILP12757 684 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 ACTN1P12814 892 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 PAX3P23760 479 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 TBXAS1P24557 533 aaPredicted RBP15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 MFAP3P55082 362 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 OSTNP61366 133 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 LRIT3Q3SXY7 679 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 WDR44Q5JSH3 913 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 GPR153Q6NV75 609 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 TDHQ8IZJ6 230 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 LRRC52Q8N7C0 313 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 C1orf127Q8N9H9 656 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 CPLX3Q8WVH0 158 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 MTMR12Q9C0I1 747 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 PRKAG2Q9UGJ0 569 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 SIX4Q9UIU6 781 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 DNAJC12Q9UKB3 198 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 FHOD1Q9Y613 1164 aa15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHMT1P1-201ENST00000419974 ANO9A1A5B4 782 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 LRRC53A6NM62 1247 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 F8VZ95 297 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 MGEA5O60502 916 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 CST3P01034 146 aaPredicted RBP15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 NFICP08651 508 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 CLTBP09497 229 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 FAM163BP0C2L3 166 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ITGA4P13612 1032 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 LRPAP1P30533 357 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 STAT1P42224 750 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 RBP5P82980 135 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 TFAMQ00059 246 aaKnown RBP15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 BIRC3Q13489 604 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 RRAGAQ7L523 313 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 IRF2BP2Q7Z5L9 587 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ECHDC2Q86YB7 292 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 GSTCDQ8NEC7 633 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 BEST2Q8NFU1 509 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 SHC3Q92529 594 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 SEPT8Q92599 483 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ZMAT2Q96NC0 199 aaKnown RBP15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ADAM2Q99965 735 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 IMPG2Q9BZV3 1241 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 UBE2OQ9C0C9 1292 aaKnown RBP15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 SLC38A7Q9NVC3 462 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 ATP11BQ9Y2G3 1177 aa15.35■□□□□ 0.05
SHMT1P1-201ENST00000419974 RALGAPA2Q2PPJ7 1873 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 GFPT2O94808 682 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 FERP16591 822 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 SOX5P35711 763 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 PIK3CAP42336 1068 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 LRMPQ12912 555 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 SFMBT2Q5VUG0 894 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms