RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 POLE2P56282 527 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 TOB2Q14106 344 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 EPHA7Q15375 998 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 PTPRN2Q92932 1015 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 HSPBP1Q9NZL4 362 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ABCB6Q9NP58 842 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ATP8B1O43520 1251 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 GRAP2O75791 330 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 DGAT1O75907 488 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 THPOP40225 353 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 AP2B1P63010 937 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 HIBCHQ6NVY1 386 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ANKMY2Q8IV38 441 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ACTR5Q9H9F9 607 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 CACNA2D2Q9NY47 1150 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ABI2Q9NYB9 513 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 NCALDP61601 193 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 LAMB3Q13751 1172 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 OOSP2Q86WS3 158 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 GLT1D1Q96MS3 346 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 CD274Q9NZQ7 290 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 AURKCQ9UQB9 309 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 H0Y3Z8 333 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 PCSK1P29120 753 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 CDC27P30260 824 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 KHDRBS2Q5VWX1 349 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ARL8AQ96BM9 186 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 MCEEQ96PE7 176 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 YME1L1Q96TA2 773 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 FLT1P17948 1338 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 GSG1L2A8MUP6 293 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 H0Y626 953 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ANGPT2O15123 496 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 TDRD10Q5VZ19 366 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
PTCH1-205ENST00000418258 ARHGEF38Q9NXL2 777 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ATP5HO75947 161 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 IL18RAPO95256 599 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 CYP2C19P33261 490 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ETFBP38117 255 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 KCNB1Q14721 858 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 NCAPHQ15003 741 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 IZUMO3Q5VZ72 239 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 FAM129AQ9BZQ8 928 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 HPCAP84074 193 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 CUL4AQ13619 759 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 EPB42P16452 691 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 COG1Q8WTW3 980 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 TSPAN17Q96FV3 270 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 HES6Q96HZ4 224 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 AGPAT1Q99943 283 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 RRP15Q9Y3B9 282 aaKnown RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 CYP2C9P11712 490 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ATF7IP2Q5U623 682 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ICA1LQ8NDH6 482 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 FAM47DPA6NHR8 397 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 CDH18Q13634 790 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 GUCA1CO95843 209 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SLC25A27O95847 323 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 NCAM1P13591 858 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 IL10P22301 178 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 PAN2Q504Q3 1202 aaKnown RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SHCBP1Q8NEM2 672 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 SENP7Q9BQF6 1050 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF556Q9HAH1 456 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-205ENST00000418258 ARHGAP26Q9UNA1 814 aa11.78□□□□□ -0.52
PTCH1-205ENST00000418258 GOLGA4Q13439 2230 aaKnown RBP11.77□□□□□ -0.52
PTCH1-205ENST00000418258 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 SLC25A41Q8N5S1 370 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms