RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 CNTN3Q9P232 1028 aa7.47□□□□□ -1.21
NCL-203ENST00000417652 CGNQ9P2M7 1197 aaKnown RBP7.47□□□□□ -1.21
NCL-203ENST00000417652 CPSF3Q9UKF6 684 aaKnown RBP7.47□□□□□ -1.21
NCL-203ENST00000417652 FRMD4BQ9Y2L6 1034 aa7.47□□□□□ -1.21
NCL-203ENST00000417652 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
NCL-203ENST00000417652 STYXL1Q9Y6J8 313 aa7.47□□□□□ -1.21
NCL-203ENST00000417652 ARHGEF37A1IGU5 675 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 C2orf71A6NGG8 1288 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 HIDE1A8MVS5 230 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PHACTR2O75167 634 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 RHOBTB3O94955 611 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 KIF4AO95239 1232 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 TNNC2P02585 160 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 ADH1AP07327 375 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 KRT19P08727 400 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 DLATP10515 647 aaKnown RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 TNNI1P19237 187 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 RPL13P26373 211 aaKnown RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 ADSSP30520 456 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 GTF2F1P35269 517 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCL-203ENST00000417652 HYAL1Q12794 435 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 SNW1Q13573 536 aaKnown RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 CAMK1Q14012 370 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 KCNB1Q14721 858 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 CLUL1Q15846 466 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 CAMK4Q16566 473 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 UPP1Q16831 310 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 XKR4Q5GH76 650 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 CEP135Q66GS9 1140 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 TAS1R1Q7RTX1 841 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 ADGRD2Q7Z7M1 963 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 USP37Q86T82 979 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PPFIBP1Q86W92 1011 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PALB2Q86YC2 1186 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 GLYCTKQ8IVS8 523 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCL-203ENST00000417652 EFHBQ8N7U6 833 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 ENGASEQ8NFI3 743 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 ATXN2LQ8WWM7 1075 aaKnown RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 ERCC4Q92889 916 aaPredicted RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 CCDC127Q96BQ5 260 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PABPC5Q96DU9 382 aaKnown RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 ANKRD36BP1Q96IX9 119 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 B3GALT6Q96L58 329 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PAAF1Q9BRP4 392 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 HERC2P3Q9BVR0 1158 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 GPR62Q9BZJ7 368 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 ZBP1Q9H171 429 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 UBE2ZQ9H832 354 aaPredicted RBP7.46□□□□□ -1.22
NCL-203ENST00000417652 PRDM6Q9NQX0 595 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCL-203ENST00000417652 DPP3Q9NY33 737 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 TUBGCP4Q9UGJ1 667 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 DPP7Q9UHL4 492 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 FAM50BQ9Y247 325 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 DERAQ9Y315 318 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PCDHA5Q9Y5H7 936 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 PLXNA4Q9HCM2 1894 aa7.46□□□□□ -1.22
NCL-203ENST00000417652 COL4A4P53420 1690 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 F8W810 466 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 H3BQ06 376 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 H7C4K7 107 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 I3L4J1 428 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 BIN1O00499 593 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 PDXKO00764 312 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 FSCN2O14926 492 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 GALR2O43603 387 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 NR3C1P04150 777 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 NFICP08651 508 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 KRT13P13646 458 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 CYP3A5P20815 502 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 BRCC3P46736 316 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 GUCY2FP51841 1108 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 ARPP19P56211 112 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 POU5F1Q01860 360 aaKnown RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 DSG1Q02413 1049 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 TFF2Q03403 129 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 SOX4Q06945 474 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 EHHADHQ08426 723 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 ADAM15Q13444 863 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 PTPN14Q15678 1187 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 PSMD5Q16401 504 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 SNRNP35Q16560 246 aaKnown RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 DUSP6Q16828 381 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 DUOXA2Q1HG44 320 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 PUS10Q3MIT2 529 aaKnown RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 ZNF658Q5TYW1 1059 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 SPATA1Q5VX52 437 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.45□□□□□ -1.22
NCL-203ENST00000417652 ANKS3Q6ZW76 656 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 METTL23Q86XA0 190 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 NT5DC4Q86YG4 428 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 CBWD2Q8IUF1 395 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 BRSK2Q8IWQ3 736 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 CSGALNACT2Q8N6G5 542 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 KIAA0895Q8NCT3 520 aa7.45□□□□□ -1.22
NCL-203ENST00000417652 CASP10Q92851 521 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms