RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 GCLMP48507 274 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 MYO1EQ12965 1108 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 TUSC3Q13454 348 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 IQCB1Q15051 598 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 PARD3BQ8TEW8 1205 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 VWCEQ96DN2 955 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 UROC1Q96N76 676 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 ZNF558Q96NG5 402 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 VPS16Q9H269 839 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 TMEM8AQ9HCN3 771 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 TBC1D13Q9NVG8 400 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 INTS13Q9NVM9 706 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 DPP3Q9NY33 737 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 TUBGCP4Q9UGJ1 667 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 ITGA11Q9UKX5 1188 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 NLRC5Q86WI3 1866 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 PODXLO00592 558 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 PTGESO14684 152 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CYP3A5P20815 502 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 POLR2BP30876 1174 aaKnown RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 GTF2H1P32780 548 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CA8P35219 290 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CTNNB1P35222 781 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 RABGGTBP53611 331 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 MARSP56192 900 aaKnown RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 DLG4P78352 724 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 RBP5P82980 135 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 ENPEPQ07075 957 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CDKAL1Q5VV42 579 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 KRT39Q6A163 491 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 C18orf25Q96B23 403 aaPredicted RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CASD1Q96PB1 797 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 POP1Q99575 1024 aaKnown RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 GOLGA2P5Q9HBQ8 144 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 AGAP1Q9UPQ3 857 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 FAN1Q9Y2M0 1017 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 PRG3Q9Y2Y8 225 aaPredicted RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 KIAA1671Q9BY89 1806 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 MKI67P46013 3256 aaKnown RBP9.13□□□□□ -0.95
TRIM48-201ENST00000417545 ARHGEF37A1IGU5 675 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 GOLGA6L3A6NEY3 463 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 GRXCR1A8MXD5 290 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TADA2AO75478 443 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 ALDH2P05091 517 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 P4HA1P13674 534 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PPM1AP35813 382 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PNPLA4P41247 253 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 FMO5P49326 533 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 GUCY2FP51841 1108 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 COPB1P53618 953 aaKnown RBP9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TNNC1P63316 161 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 NCAPHQ15003 741 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 KRT31Q15323 416 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 ZNF699Q32M78 642 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 SV2CQ496J9 727 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 VWA3BQ502W6 1294 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 XKR4Q5GH76 650 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PPP2R2DQ66LE6 453 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TRIM59Q8IWR1 403 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 FBXL13Q8NEE6 735 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 OR5B17Q8NGF7 314 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TMEM169Q96HH4 297 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 ZMAT2Q96NC0 199 aaKnown RBP9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PPP1R10Q96QC0 940 aaKnown RBP9.13□□□□□ -0.95
TRIM48-201ENST00000417545 MED15Q96RN5 788 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 TMEM175Q9BSA9 504 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 NDST4Q9H3R1 872 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 MIOSQ9NXC5 875 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PLAGL2Q9UPG8 496 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 PCDHA11Q9Y5I1 949 aa9.13□□□□□ -0.95
TRIM48-201ENST00000417545 MRPL42Q9Y6G3 142 aaKnown RBP9.13□□□□□ -0.95
TRIM48-201ENST00000417545 INPPL1O15357 1258 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 TRAPPC3O43617 180 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 B3GAT3O94766 335 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 HLA-DRAP01903 254 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 CA3P07451 260 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 TRIM21P19474 475 aaKnown RBP9.12□□□□□ -0.95
TRIM48-201ENST00000417545 RPL9P32969 192 aaKnown RBP9.12□□□□□ -0.95
TRIM48-201ENST00000417545 TAF6P49848 677 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 CLCNKBP51801 687 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 AFF1P51825 1210 aaKnown RBP9.12□□□□□ -0.95
TRIM48-201ENST00000417545 WNT7BP56706 349 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 BCAR1P56945 870 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 UBASH3AP57075 661 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 HTRA4P83105 476 aaPredicted RBP9.12□□□□□ -0.95
TRIM48-201ENST00000417545 FANCCQ00597 558 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 UBXN1Q04323 297 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 KRT17Q04695 432 aa9.12□□□□□ -0.95
TRIM48-201ENST00000417545 PPP3CAQ08209 521 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms