RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RAD54LQ92698 747 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 BICD1Q96G01 975 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 REEP2Q9BRK0 252 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 VPS37CA5D8V6 355 aaPredicted RBP20.1■□□□□ 0.81
VPS16-204ENST00000417508 FAM13AO94988 1023 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 PIGRP01833 764 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 SRFP11831 508 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 MRPL58Q14197 206 aaKnown RBP20.1■□□□□ 0.81
VPS16-204ENST00000417508 VARS2Q5ST30 1063 aaKnown RBP20.1■□□□□ 0.81
VPS16-204ENST00000417508 APPL2Q8NEU8 664 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 SLC7A14Q8TBB6 771 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 INTS4Q96HW7 963 aaKnown RBP20.1■□□□□ 0.81
VPS16-204ENST00000417508 SUSD3Q96L08 255 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 RTP3Q9BQQ7 232 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 CDH7Q9ULB5 785 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 KCNH3Q9ULD8 1083 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 MAFFQ9ULX9 164 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 TBX20Q9UMR3 447 aa20.1■□□□□ 0.81
VPS16-204ENST00000417508 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 I3L4J1 428 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 XPOTO43592 962 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 TRAK2O60296 914 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 TBC1D4O60343 1298 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 ABLIM3O94929 683 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 KRT18P05783 430 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 PLCG1P19174 1290 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 CYP3A5P20815 502 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 ELF1P32519 619 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 LIG4P49917 911 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 DHX8Q14562 1220 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 MCM6Q14566 821 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 KARSQ15046 597 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 RSPO2Q6UXX9 243 aaPredicted RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 GET4Q7L5D6 327 aaPredicted RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 TMEM105Q8N8V8 129 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 RSAD2Q8WXG1 361 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 LARP4BQ92615 738 aaKnown RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 C18orf25Q96B23 403 aaPredicted RBP20.09■□□□□ 0.81
VPS16-204ENST00000417508 POLIQ9UNA4 740 aa20.09■□□□□ 0.81
VPS16-204ENST00000417508 TTC26A0AVF1 554 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 ARHGEF37A1IGU5 675 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 CCL16O15467 120 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 MEFVO15553 781 aaPredicted RBP20.08■□□□□ 0.81
VPS16-204ENST00000417508 AOC1P19801 751 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
VPS16-204ENST00000417508 LRPAP1P30533 357 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 HTR4Q13639 388 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 TPGS2Q68CL5 300 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 MTSS1LQ765P7 747 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 CD302Q8IX05 232 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 FLCNQ8NFG4 579 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 AVENQ9NQS1 362 aaPredicted RBP20.08■□□□□ 0.81
VPS16-204ENST00000417508 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.81
VPS16-204ENST00000417508 UBQLN1Q9UMX0 589 aaKnown RBP20.08■□□□□ 0.81
VPS16-204ENST00000417508 SRPRBQ9Y5M8 271 aaKnown RBP20.08■□□□□ 0.81
VPS16-204ENST00000417508 HNRNPDLO14979 420 aaKnown RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 OGTO15294 1046 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 TBCAO75347 108 aaKnown RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 ADRB2P07550 413 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 CXCL8P10145 99 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 ATF2P15336 505 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 NPR3P17342 541 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 PAX3P23760 479 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 MCM4P33991 863 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 GTF2BQ00403 316 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 ROR1Q01973 937 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 GRIN1Q05586 938 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 PPP2R3AQ06190 1150 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 PTPAQ15257 358 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 ZBTB6Q15916 424 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 SEZ6Q53EL9 994 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 TCEAL8Q8IYN2 117 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 SIX5Q8N196 739 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 LRRC15Q8TF66 581 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 ATOH1Q92858 354 aaPredicted RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 OXCT2Q9BYC2 517 aaPredicted RBP20.07■□□□□ 0.8
VPS16-204ENST00000417508 HAPLN2Q9GZV7 340 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 ST6GALNAC4Q9H4F1 302 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 SLC2A4RGQ9NR83 387 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 WDFY4Q6ZS81 3184 aa20.07■□□□□ 0.8
VPS16-204ENST00000417508 A0A0B4J269 797 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 K7ENM7 598 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 NARSO43776 548 aaKnown RBP20.06■□□□□ 0.8
VPS16-204ENST00000417508 PTPN2P17706 415 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 SYT1P21579 422 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 CTXN3Q4LDR2 81 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 ZNF280DQ6N043 979 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 DDX12PQ92771 950 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 FGF13Q92913 245 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 KIF12Q96FN5 646 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
VPS16-204ENST00000417508 DNMT3BQ9UBC3 853 aaKnown RBP20.06■□□□□ 0.8
VPS16-204ENST00000417508 FBXL5Q9UKA1 691 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 PCDHB8Q9UN66 801 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 CLIC4Q9Y696 253 aa20.06■□□□□ 0.8
VPS16-204ENST00000417508 MORC2Q9Y6X9 1032 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms