RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 RSPO2Q6UXX9 243 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-208ENST00000417285 RSAD2Q8WXG1 361 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 C18orf25Q96B23 403 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-208ENST00000417285 TSPAN18Q96SJ8 248 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 PARVGQ9HBI0 331 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 BLOC1S4Q9NUP1 217 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 CCL16O15467 120 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 FAM13AO94988 1023 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 KRT18P05783 430 aaKnown RBP27.63■■■□□ 2.01
VEGFA-208ENST00000417285 PLCG1P19174 1290 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 DDIT3P35638 169 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 CACNB1Q02641 598 aaPredicted RBP27.63■■■□□ 2.01
VEGFA-208ENST00000417285 RESTQ13127 1097 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 DHX8Q14562 1220 aaKnown RBP27.63■■■□□ 2.01
VEGFA-208ENST00000417285 KARSQ15046 597 aaKnown RBP27.63■■■□□ 2.01
VEGFA-208ENST00000417285 TMEM105Q8N8V8 129 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 RAD54LQ92698 747 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 CCSER1Q9C0I3 900 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 CDH7Q9ULB5 785 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 TBX20Q9UMR3 447 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 POLIQ9UNA4 740 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 CLIC4Q9Y696 253 aa27.63■■■□□ 2.01
VEGFA-208ENST00000417285 ZFHX2Q9C0A1 2572 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-208ENST00000417285 SRFP11831 508 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 LIG4P49917 911 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 VARS2Q5ST30 1063 aaKnown RBP27.62■■■□□ 2.01
VEGFA-208ENST00000417285 SIX5Q8N196 739 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 APPL2Q8NEU8 664 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 FLCNQ8NFG4 579 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 RTP3Q9BQQ7 232 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 KCNH3Q9ULD8 1083 aa27.62■■■□□ 2.01
VEGFA-208ENST00000417285 MEFVO15553 781 aaPredicted RBP27.61■■■□□ 2.01
VEGFA-208ENST00000417285 TRAK2O60296 914 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 TBC1D4O60343 1298 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 ABLIM3O94929 683 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 PIGRP01833 764 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 ELF1P32519 619 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 HTR4Q13639 388 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 MRPL58Q14197 206 aaKnown RBP27.61■■■□□ 2.01
VEGFA-208ENST00000417285 MCM6Q14566 821 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 PTPAQ15257 358 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 SEZ6Q53EL9 994 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 ATOH1Q92858 354 aaPredicted RBP27.61■■■□□ 2.01
VEGFA-208ENST00000417285 SUSD3Q96L08 255 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 MAFFQ9ULX9 164 aa27.61■■■□□ 2.01
VEGFA-208ENST00000417285 TTC26A0AVF1 554 aa27.6■■■□□ 2.01
VEGFA-208ENST00000417285 HNRNPDLO14979 420 aaKnown RBP27.6■■■□□ 2.01
VEGFA-208ENST00000417285 NARSO43776 548 aaKnown RBP27.6■■■□□ 2.01
VEGFA-208ENST00000417285 CYP3A5P20815 502 aa27.6■■■□□ 2.01
VEGFA-208ENST00000417285 TPGS2Q68CL5 300 aa27.6■■■□□ 2.01
VEGFA-208ENST00000417285 LARP4BQ92615 738 aaKnown RBP27.6■■■□□ 2.01
VEGFA-208ENST00000417285 FOXD4L1Q9NU39 408 aa27.6■■■□□ 2.01
VEGFA-208ENST00000417285 CCDC39Q9UFE4 941 aa27.6■■■□□ 2.01
VEGFA-208ENST00000417285 TRIP11Q15643 1979 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 XPOTO43592 962 aaKnown RBP27.59■■■□□ 2.01
VEGFA-208ENST00000417285 TBCAO75347 108 aaKnown RBP27.59■■■□□ 2.01
VEGFA-208ENST00000417285 CFHP08603 1231 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 CXCL8P10145 99 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 ATF2P15336 505 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 NPR3P17342 541 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 AOC1P19801 751 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 MARCKSP29966 332 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-208ENST00000417285 MCM4P33991 863 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 NTHL1P78549 312 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 ZBTB6Q15916 424 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 MTSS1LQ765P7 747 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 LRRC15Q8TF66 581 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 FGF13Q92913 245 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 HAPLN2Q9GZV7 340 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 ZSCAN16Q9H4T2 348 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-208ENST00000417285 SRPRBQ9Y5M8 271 aaKnown RBP27.59■■■□□ 2.01
VEGFA-208ENST00000417285 KMT2EQ8IZD2 1858 aa27.59■■■□□ 2.01
VEGFA-208ENST00000417285 ARHGEF37A1IGU5 675 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 H0Y858 1186 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 K7ENM7 598 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 OGTO15294 1046 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 GTF2BQ00403 316 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 ROR1Q01973 937 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 PPP2R3AQ06190 1150 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 PABPC1LQ4VXU2 614 aaKnown RBP27.58■■■□□ 2.01
VEGFA-208ENST00000417285 CD302Q8IX05 232 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 TCEAL8Q8IYN2 117 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 KRI1Q8N9T8 703 aaKnown RBP27.58■■■□□ 2.01
VEGFA-208ENST00000417285 KIF12Q96FN5 646 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 ZHX3Q9H4I2 956 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 SLC2A4RGQ9NR83 387 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 DNMT3BQ9UBC3 853 aaKnown RBP27.58■■■□□ 2.01
VEGFA-208ENST00000417285 FBXO2Q9UK22 296 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-208ENST00000417285 FBXL5Q9UKA1 691 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 UBQLN1Q9UMX0 589 aaKnown RBP27.58■■■□□ 2.01
VEGFA-208ENST00000417285 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 NUMBLQ9Y6R0 609 aa27.58■■■□□ 2.01
VEGFA-208ENST00000417285 A0A0B4J269 797 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 PRRG1O14668 218 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 STX6O43752 255 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 LRPAP1P30533 357 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 TXLNAP40222 546 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 CTXN3Q4LDR2 81 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 FAM173BQ6P4H8 233 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 EPSTI1Q96J88 318 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms