RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MTSS1LQ765P7 747 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 TAS1R3Q7RTX0 852 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 SHDQ96IW2 340 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 BCO2Q9BYV7 579 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 BRMS1Q9HCU9 246 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 ZFP37Q9Y6Q3 630 aaPredicted RBP14.18□□□□□ -0.14
LINC00339-202ENST00000416769 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 ARHGEF35A5YM69 484 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 TMEM189-UBE2V1I3L0A0 370 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 NAMPTP43490 491 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 PRKCQQ04759 706 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 MTAPQ13126 283 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 PUM1Q14671 1186 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 FAM78AQ5JUQ0 283 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 PRSS36Q5K4E3 855 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 C18orf25Q96B23 403 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 CORO1BQ9BR76 489 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 CDT1Q9H211 546 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 PARD6AQ9NPB6 346 aa14.17□□□□□ -0.14
LINC00339-202ENST00000416769 NDRG2Q9UN36 371 aaKnown RBP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 SMG5Q9UPR3 1016 aaKnown RBP14.17□□□□□ -0.14
LINC00339-202ENST00000416769 MAP1BP46821 2468 aaKnown RBP14.16□□□□□ -0.14
LINC00339-202ENST00000416769 CITO14578 2027 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 MOSPD3O75425 235 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 TGM1P22735 817 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 ELAVL2Q12926 359 aaKnown RBP14.16□□□□□ -0.14
LINC00339-202ENST00000416769 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 VARS2Q5ST30 1063 aaKnown RBP14.16□□□□□ -0.14
LINC00339-202ENST00000416769 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 DAW1Q8N136 415 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 NELL1Q92832 810 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 CLDN23Q96B33 292 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 ADPGKQ9BRR6 497 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 KCNH3Q9ULD8 1083 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
LINC00339-202ENST00000416769 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 PODXLO00592 558 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 ABLIM1O14639 778 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 LILRB5O75023 590 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 ECI2O75521 394 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 KRT37O76014 449 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 POU2F2P09086 479 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
LINC00339-202ENST00000416769 TDGF1P13385 188 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 SYT1P21579 422 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 RPA1P27694 616 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 VIPR2P41587 438 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 ZNF528Q3MIS6 628 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 DCAF4L1Q3SXM0 396 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 WDR44Q5JSH3 913 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 ZBTB45Q96K62 511 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-202ENST00000416769 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
LINC00339-202ENST00000416769 PRMT8Q9NR22 394 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-202ENST00000416769 FBXO4Q9UKT5 387 aa14.15□□□□□ -0.14
LINC00339-202ENST00000416769 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 DCDC2BA2VCK2 349 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 H3BQV1 296 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 STX6O43752 255 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ABLIM3O94929 683 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 CDR1P51861 262 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ATXN1P54253 815 aaKnown RBP14.14□□□□□ -0.15
LINC00339-202ENST00000416769 DMWDQ09019 674 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00339-202ENST00000416769 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 VITQ6UXI7 678 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 OSBPL6Q9BZF3 934 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 EPC1Q9H2F5 836 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 CYP4F11Q9HBI6 524 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 PTPRHQ9HD43 1115 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 C2orf42Q9NWW7 574 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 ZSCAN32Q9NX65 697 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 CEP72Q9P209 647 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 FBXL5Q9UKA1 691 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms