RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
MDC1-202ENST00000416571 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
MDC1-202ENST00000416571 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
MDC1-202ENST00000416571 TRIP11Q15643 1979 aa11.03□□□□□ -0.64
MDC1-202ENST00000416571 I3L4J1 428 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 ZNF197O14709 1029 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 MED24O75448 989 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 CTDNEP1O95476 244 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 SPATA31C1P0DKV0 1188 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 MCM7P33993 719 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 BRCC3P46736 316 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 EFNA5P52803 228 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 FOSBP53539 338 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 ROR1Q01973 937 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 MTAPQ13126 283 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 GRM2Q14416 872 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 UPP1Q16831 310 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 CYP4A22Q5TCH4 519 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 ATF7IP2Q5U623 682 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 IQCEQ6IPM2 695 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.65
MDC1-202ENST00000416571 BSNDQ8WZ55 320 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 NELL1Q92832 810 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 IRF7Q92985 503 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
MDC1-202ENST00000416571 MTMR9Q96QG7 549 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 IER2Q9BTL4 223 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.65
MDC1-202ENST00000416571 CCDC94Q9BW85 323 aaPredicted RBP11.02□□□□□ -0.65
MDC1-202ENST00000416571 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 CYP4F11Q9HBI6 524 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 AVENQ9NQS1 362 aaPredicted RBP11.02□□□□□ -0.65
MDC1-202ENST00000416571 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 SLC38A7Q9NVC3 462 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
MDC1-202ENST00000416571 ARHGEF37A1IGU5 675 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 WDR27A2RRH5 827 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 H7C4K7 107 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 K7ERI5 159 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 ATF2P15336 505 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 CYP11B2P19099 503 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 GDI1P31150 447 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 CCR3P51677 355 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 HAUS3Q68CZ6 603 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 SLC8B1Q6J4K2 584 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 PRR23BQ6ZRT6 265 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
MDC1-202ENST00000416571 KIFC3Q9BVG8 833 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 CHRDQ9H2X0 955 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 INSL5Q9Y5Q6 135 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 TICRRQ7Z2Z1 1910 aa11.01□□□□□ -0.65
MDC1-202ENST00000416571 SMIM28A0A1B0GU29 152 aa11□□□□□ -0.65
MDC1-202ENST00000416571 PODXLO00592 558 aa11□□□□□ -0.65
MDC1-202ENST00000416571 WNT7AO00755 349 aa11□□□□□ -0.65
MDC1-202ENST00000416571 SYN3O14994 580 aa11□□□□□ -0.65
MDC1-202ENST00000416571 ABLIM3O94929 683 aa11□□□□□ -0.65
MDC1-202ENST00000416571 EDN1P05305 212 aa11□□□□□ -0.65
MDC1-202ENST00000416571 FDPSP14324 419 aaKnown RBP11□□□□□ -0.65
MDC1-202ENST00000416571 PSMC3P17980 439 aa11□□□□□ -0.65
MDC1-202ENST00000416571 RPA1P27694 616 aa11□□□□□ -0.65
MDC1-202ENST00000416571 OSTNP61366 133 aa11□□□□□ -0.65
MDC1-202ENST00000416571 SPEM2Q0P670 501 aa11□□□□□ -0.65
MDC1-202ENST00000416571 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
MDC1-202ENST00000416571 LPAL2Q16609 132 aa11□□□□□ -0.65
MDC1-202ENST00000416571 ZNF568Q3ZCX4 644 aa11□□□□□ -0.65
MDC1-202ENST00000416571 FAM78AQ5JUQ0 283 aa11□□□□□ -0.65
MDC1-202ENST00000416571 PRSS36Q5K4E3 855 aa11□□□□□ -0.65
MDC1-202ENST00000416571 TPGS2Q68CL5 300 aa11□□□□□ -0.65
MDC1-202ENST00000416571 TCEAL8Q8IYN2 117 aa11□□□□□ -0.65
MDC1-202ENST00000416571 CELF5Q8N6W0 485 aaKnown RBP11□□□□□ -0.65
MDC1-202ENST00000416571 NECAB1Q8N987 351 aa11□□□□□ -0.65
MDC1-202ENST00000416571 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
MDC1-202ENST00000416571 FAM3CQ92520 227 aa11□□□□□ -0.65
MDC1-202ENST00000416571 KIFAP3Q92845 792 aa11□□□□□ -0.65
MDC1-202ENST00000416571 ZNF512Q96ME7 567 aaPredicted RBP11□□□□□ -0.65
MDC1-202ENST00000416571 ASB16Q96NS5 453 aa11□□□□□ -0.65
MDC1-202ENST00000416571 TMEM60Q9H2L4 133 aa11□□□□□ -0.65
MDC1-202ENST00000416571 LMAN1LQ9HAT1 526 aa11□□□□□ -0.65
MDC1-202ENST00000416571 TNFSF13BQ9Y275 285 aa11□□□□□ -0.65
MDC1-202ENST00000416571 PIAS3Q9Y6X2 628 aa11□□□□□ -0.65
MDC1-202ENST00000416571 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
MDC1-202ENST00000416571 CCDC169A6NNP5 214 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 ZNF263O14978 683 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 MICAL2O94851 1124 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 OR52Z1P0C646 297 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 MYL4P12829 197 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 CPB1P15086 417 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 FCARP24071 287 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 IGFBP6P24592 240 aaPredicted RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 MCM4P33991 863 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 GRM5P41594 1212 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 SOX4Q06945 474 aaPredicted RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 FZD5Q13467 585 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 CTXN3Q4LDR2 81 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms