RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NMT1P30419 496 aaKnown RBP16.5■□□□□ 0.23
UBXN4-203ENST00000416538 GBP2P32456 591 aaPredicted RBP16.5■□□□□ 0.23
UBXN4-203ENST00000416538 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 SMTNP53814 917 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 RAB33AQ14088 237 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 CYP26C1Q6V0L0 522 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 TMEM105Q8N8V8 129 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 SLC7A14Q8TBB6 771 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
UBXN4-203ENST00000416538 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 KCNH6Q9H252 994 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
UBXN4-203ENST00000416538 EPS15L1Q9UBC2 864 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 DUSP12Q9UNI6 340 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 MIA3Q5JRA6 1907 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 COL4A2P08572 1712 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 A0A087X0B3 334 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 TTC26A0AVF1 554 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 CCL16O15467 120 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 FAM13AO94988 1023 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 AVPR2P30518 371 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 ROR1Q01973 937 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
UBXN4-203ENST00000416538 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
UBXN4-203ENST00000416538 GRASPQ7Z6J2 395 aaPredicted RBP16.49■□□□□ 0.23
UBXN4-203ENST00000416538 PIDD1Q9HB75 910 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 PARVGQ9HBI0 331 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 HCFC1R1Q9NWW0 138 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 DPP7Q9UHL4 492 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 TBX20Q9UMR3 447 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 BACE2Q9Y5Z0 518 aa16.49■□□□□ 0.23
UBXN4-203ENST00000416538 WDR27A2RRH5 827 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 NRG2O14511 850 aaPredicted RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 PPEF2O14830 753 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 CLDN3O15551 220 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 PDCP20941 246 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 HOXA9P31269 272 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 TDGQ13569 410 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 HTR4Q13639 388 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 ZC2HC1CQ53FD0 456 aaPredicted RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 LIN9Q5TKA1 542 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 MYCT1Q8N699 235 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 BICD1Q96G01 975 aa16.48■□□□□ 0.23
UBXN4-203ENST00000416538 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
UBXN4-203ENST00000416538 ANKRD63C9JTQ0 380 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 TRAK2O60296 914 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBXN4-203ENST00000416538 LAMP2P13473 410 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 NPR3P17342 541 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 LIG4P49917 911 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 MRPL58Q14197 206 aaKnown RBP16.47■□□□□ 0.23
UBXN4-203ENST00000416538 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 SLC8B1Q6J4K2 584 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 MAP4K3Q8IVH8 894 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 ITFG1Q8TB96 612 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 STAMQ92783 540 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 SUSD3Q96L08 255 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 RPP25Q9BUL9 199 aaKnown RBP16.47■□□□□ 0.23
UBXN4-203ENST00000416538 IGSF9Q9P2J2 1179 aa16.47■□□□□ 0.23
UBXN4-203ENST00000416538 SRPRBQ9Y5M8 271 aaKnown RBP16.47■□□□□ 0.23
UBXN4-203ENST00000416538 A0A0B4J269 797 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 MYMKA6NI61 221 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 ANHXE9PGG2 379 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 SYN3O14994 580 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 PPP1R37O75864 691 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 ADRB2P07550 413 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 CLTAP09496 248 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 MCM4P33991 863 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 MATR3P43243 847 aaKnown RBP eCLIP16.46■□□□□ 0.23
UBXN4-203ENST00000416538 GTF2BQ00403 316 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
UBXN4-203ENST00000416538 DNAJC19Q96DA6 116 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 FGFBP2Q9BYJ0 223 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 DNMT3BQ9UBC3 853 aaKnown RBP16.46■□□□□ 0.23
UBXN4-203ENST00000416538 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 PATJQ8NI35 1801 aa16.46■□□□□ 0.23
UBXN4-203ENST00000416538 OBSL1O75147 1896 aa16.46■□□□□ 0.22
UBXN4-203ENST00000416538 DENND4CQ5VZ89 1909 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 KRBA1A5PL33 1030 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 H0YCG3 227 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 OGTO15294 1046 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms