RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
PDLIM2-208ENST00000416159 CCSER1Q9C0I3 900 aa19.2■□□□□ 0.66
PDLIM2-208ENST00000416159 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
PDLIM2-208ENST00000416159 FBXL21Q9UKT6 434 aa19.2■□□□□ 0.66
PDLIM2-208ENST00000416159 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-208ENST00000416159 H7C4K7 107 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 CCL16O15467 120 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 MEFVO15553 781 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 TRAK2O60296 914 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 ABCD1P33897 745 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 LIG4P49917 911 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 ZNF131P52739 623 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 SEZ6Q53EL9 994 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 VARS2Q5ST30 1063 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 SLC7A14Q8TBB6 771 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 LRRC15Q8TF66 581 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 LARP4BQ92615 738 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 C18orf25Q96B23 403 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 WNT16Q9UBV4 365 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 TBX20Q9UMR3 447 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 POLIQ9UNA4 740 aa19.19■□□□□ 0.66
PDLIM2-208ENST00000416159 ANHXE9PGG2 379 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 K7ENM7 598 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 GALR2O43603 387 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 PIGRP01833 764 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 DDIT3P35638 169 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 SLC8B1Q6J4K2 584 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 TMEM105Q8N8V8 129 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 ZNF461Q8TAF7 563 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 SUSD3Q96L08 255 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 HAPLN2Q9GZV7 340 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 CLIC4Q9Y696 253 aa19.18■□□□□ 0.66
PDLIM2-208ENST00000416159 TTC26A0AVF1 554 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 HNRNPDLO14979 420 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 NARSO43776 548 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 TBCAO75347 108 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 CXCL8P10145 99 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 SRFP11831 508 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 SYT1P21579 422 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 ELF1P32519 619 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 MCM4P33991 863 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 NTHL1P78549 312 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 PTPAQ15257 358 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 APPL2Q8NEU8 664 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 FLCNQ8NFG4 579 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 INTS4Q96HW7 963 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 TSPAN18Q96SJ8 248 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 BACH2Q9BYV9 841 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 ZHX3Q9H4I2 956 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 CCDC39Q9UFE4 941 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 PDCD11Q14690 1871 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-208ENST00000416159 OGTO15294 1046 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 XPOTO43592 962 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 TBC1D4O60343 1298 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 ABLIM3O94929 683 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 CYP3A5P20815 502 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 MARCKSP29966 332 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 LRPAP1P30533 357 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 ROR1Q01973 937 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 PPP2R3AQ06190 1150 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 RESTQ13127 1097 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 HTR4Q13639 388 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 SIX5Q8N196 739 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 KRI1Q8N9T8 703 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 KIF12Q96FN5 646 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 EPSTI1Q96J88 318 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 RTP3Q9BQQ7 232 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 RPF1Q9H9Y2 349 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 DNMT3BQ9UBC3 853 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 UBQLN1Q9UMX0 589 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 CACNA1HO95180 2353 aa19.16■□□□□ 0.66
PDLIM2-208ENST00000416159 CFHP08603 1231 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 NPR3P17342 541 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 GTF2BQ00403 316 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 ZBTB6Q15916 424 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 CTXN3Q4LDR2 81 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 PABPC1LQ4VXU2 614 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 CWF19L1Q69YN2 538 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 CD302Q8IX05 232 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 DDX12PQ92771 950 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 ATOH1Q92858 354 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 FGF13Q92913 245 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 FIZ1Q96SL8 496 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 TUBGCP4Q9UGJ1 667 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 FBXL5Q9UKA1 691 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 PCDHB8Q9UN66 801 aa19.15■□□□□ 0.66
PDLIM2-208ENST00000416159 ARHGEF37A1IGU5 675 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 WDR27A2RRH5 827 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 LACTBL1A8MY62 500 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 PRRG1O14668 218 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 LRG1P02750 347 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ADRB2P07550 413 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ATF2P15336 505 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 AOC1P19801 751 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms