RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 NPFFR2Q9Y5X5 522 aa7.12□□□□□ -1.27
PTCD2P2-201ENST00000415579 FER1L6Q2WGJ9 1857 aa7.12□□□□□ -1.27
PTCD2P2-201ENST00000415579 FOCADQ5VW36 1801 aa7.12□□□□□ -1.27
PTCD2P2-201ENST00000415579 LAMB1P07942 1786 aa7.12□□□□□ -1.27
PTCD2P2-201ENST00000415579 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 TNKSO95271 1327 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 STK36Q9NRP7 1315 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 IGKV6D-41A0A0C4DH26 115 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ERICH2A1L162 156 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 CCDC69A6NI79 296 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 PSMD14O00487 310 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 RANBP6O60518 1105 aaKnown RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ENTPD3O75355 529 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 CDKL5O76039 1030 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 COL6A1P12109 1028 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 METAP2P50579 478 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 CXCL9Q07325 125 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 NFATC3Q12968 1075 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 SURF1Q15526 300 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 SLC10A6Q3KNW5 377 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 RRP12Q5JTH9 1297 aaKnown RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 FKBP1CQ5VVH2 108 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 PKN3Q6P5Z2 889 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 USP53Q70EK8 1073 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 CIR1Q86X95 450 aaPredicted RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 IQCA1Q86XH1 822 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZFPM1Q8IX07 1006 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 AMOTL1Q8IY63 956 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 TMEM209Q96SK2 561 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 UBAC1Q9BSL1 405 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 OSBPL5Q9H0X9 879 aaPredicted RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 DEF6Q9H4E7 631 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZNF408Q9H9D4 720 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZNF287Q9HBT7 754 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZNF277Q9NRM2 450 aaPredicted RBP7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 IL17RBQ9NRM6 502 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
PTCD2P2-201ENST00000415579 ATRNL1Q5VV63 1379 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 PLIN4Q96Q06 1357 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CCDC196A0A1B0GTZ2 297 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 GOLGA8AA7E2F4 631 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 DLX3O60479 287 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 PRDM1O75626 825 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 AMHP03971 560 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CALM1P0DP23 149 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CALM2P0DP24 149 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CALM3P0DP25 149 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 RBM10P98175 930 aaKnown RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 TFAP4Q01664 338 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 RESTQ13127 1097 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 SYNE3Q6ZMZ3 975 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 PLEKHH3Q7Z736 793 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 FOXP4Q8IVH2 680 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZNF444Q8N0Y2 327 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 CELF2-AS1Q8N7Q2 184 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 FBXO18Q8NFZ0 1043 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 PRMT6Q96LA8 375 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 TAOK3Q9H2K8 898 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 DHX36Q9H2U1 1008 aaKnown RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZSCAN16Q9H4T2 348 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 SPON1Q9HCB6 807 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 TOMM22Q9NS69 142 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 ORC3Q9UBD5 711 aaPredicted RBP7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 SRRDQ9UH36 339 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 SWAP70Q9UH65 585 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 TSC22D4Q9Y3Q8 395 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 NAV1Q8NEY1 1877 aa7.1□□□□□ -1.27
PTCD2P2-201ENST00000415579 MYH1P12882 1939 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 TSPY2A6NKD2 308 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 FZD9O00144 591 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 CPLX1O14810 134 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 DTNBO60941 627 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 CKMP06732 381 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 RPS12P25398 132 aaKnown RBP7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 GLRBP48167 497 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 PRELPP51888 382 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 EPHB4P54760 987 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 CFAP100Q494V2 611 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 FAM47AQ5JRC9 791 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 IFIT1BQ5T764 474 aaKnown RBP7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 ATL3Q6DD88 541 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 KCNT2Q6UVM3 1135 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 EEPD1Q7L9B9 569 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 CATIPQ7Z7H3 387 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 KLHL36Q8N4N3 616 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 FAM184AQ8NB25 1140 aa7.09□□□□□ -1.27
PTCD2P2-201ENST00000415579 SLC44A5Q8NCS7 719 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms