RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 PLEKHA5Q9HAU0 1116 aa6.84□□□□□ -1.32
LMBR1-204ENST00000415428 HPS4Q9NQG7 708 aa6.84□□□□□ -1.32
LMBR1-204ENST00000415428 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.32
LMBR1-204ENST00000415428 COL4A3BPQ9Y5P4 624 aa6.84□□□□□ -1.32
LMBR1-204ENST00000415428 PIAS3Q9Y6X2 628 aa6.84□□□□□ -1.32
LMBR1-204ENST00000415428 MSH4O15457 936 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 PCDHGA12O60330 932 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 GBP2P32456 591 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 UGCGQ16739 394 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 DUOXA1Q1HG43 343 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 USP17L6PQ6QN14 398 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 CHST3Q7LGC8 479 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 SYT12Q8IV01 421 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 KIF12Q96FN5 646 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 ZNF419Q96HQ0 510 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 MBD1Q9UIS9 605 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 ZFHX2Q9C0A1 2572 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 GFRA2O00451 464 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 RAD21O60216 631 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 GDF9O60383 454 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 NPTXRO95502 500 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 VTNP04004 478 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 APPP05067 770 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 VASPP50552 380 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 NECTIN1Q15223 517 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 EPHA7Q15375 998 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 ZNF77Q15935 545 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 TMEM266Q2M3C6 531 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 SH3PXD2AQ5TCZ1 1133 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 LMBRD2Q68DH5 695 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 CCDC12Q8WUD4 166 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 SCNM1Q9BWG6 230 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 DNAJC25Q9H1X3 360 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 C2orf40Q9H1Z8 148 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 UNC45AQ9H3U1 944 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 PRMT7Q9NVM4 692 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-204ENST00000415428 MMP17Q9ULZ9 603 aa6.83□□□□□ -1.32
LMBR1-204ENST00000415428 RFPL2O75678 378 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 CCR2P41597 374 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 CCR10P46092 362 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 DNM2P50570 870 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 NTRK3Q16288 839 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GRASPQ7Z6J2 395 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TMEM174Q8WUU8 243 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TSC1Q92574 1164 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GABRG3Q99928 467 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 XPNPEP1Q9NQW7 623 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 ZNF263O14978 683 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 DFNA5O60443 496 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 PDE6CP51160 858 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 AMPD2Q01433 879 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 SART3Q15020 963 aaKnown RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 SWSAP1Q6NVH7 229 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GET4Q7L5D6 327 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TMPRSS12Q86WS5 348 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GALNT15Q8N3T1 639 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 FANCBQ8NB91 859 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 APOL6Q9BWW8 343 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 RNF26Q9BY78 433 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 FAM49AQ9H0Q0 323 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 CPVLQ9H3G5 476 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 MARK1Q9P0L2 795 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GCNT4Q9P109 453 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 SUCLA2Q9P2R7 463 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 SEC63Q9UGP8 760 aaKnown RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 KLK13Q9UKR3 277 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 ITPR1Q14643 2758 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 NRG2O14511 850 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 SGSM2O43147 1006 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 PPP3CCP48454 512 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 CD97P48960 835 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 LAMTOR4Q0VGL1 99 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TFDP1Q14186 410 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 USP33Q8TEY7 942 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 HSD17B14Q9BPX1 270 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 NTPCRQ9BSD7 190 aaKnown RBP6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TEKT3Q9BXF9 490 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 IL37Q9NZH6 218 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 PCOLCE2Q9UKZ9 415 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 TRIP11Q15643 1979 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 GVINP1Q7Z2Y8 2422 aa6.82□□□□□ -1.32
LMBR1-204ENST00000415428 PLXNA2O75051 1894 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 KHNYNO15037 678 aaKnown RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 AXIN1O15169 862 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 CAVIN2O95810 425 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 LRG1P02750 347 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 GPR17Q13304 367 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 SPOUT1Q5T280 376 aaKnown RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 PSAPL1Q6NUJ1 521 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TMEM150AQ86TG1 271 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 OVCA2Q8WZ82 227 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 CDC6Q99741 560 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TTLL2Q9BWV7 592 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 ARRDC1-AS1Q9H2J1 176 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 PDZD7Q9H5P4 517 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TASP1Q9H6P5 420 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms