RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DIAPH2O60879 1101 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 NEBLO76041 1014 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 GJB6O95452 261 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 DLATP10515 647 aaKnown RBP10.43□□□□□ -0.74
CD44-206ENST00000415148 ADSSP30520 456 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 CAP2P40123 477 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 JAK3P52333 1124 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 BPIFB4P59827 614 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 CCNG2Q16589 344 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 DAB2IPQ5VWQ8 1189 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 CBWD2Q8IUF1 395 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 MCOLN2Q8IZK6 566 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 TMEM161BQ8NDZ6 487 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 SUPT20HQ8NEM7 779 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 RDM1Q8NG50 284 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 SPIRE2Q8WWL2 714 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ATG4AQ8WYN0 398 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 GRAMD1AQ96CP6 724 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 CCDC77Q9BR77 488 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ANAPC7Q9UJX3 599 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ANAPC5Q9UJX4 755 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 TRPC5Q9UL62 973 aaPredicted RBP10.43□□□□□ -0.74
CD44-206ENST00000415148 ARL2BPQ9Y2Y0 163 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 H0YIN7 160 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ATF2P15336 505 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ABCD1P33897 745 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 LMNB2Q03252 620 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 RNASELQ05823 741 aaKnown RBP10.43□□□□□ -0.74
CD44-206ENST00000415148 MTMR1Q13613 665 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 STAT4Q14765 748 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 NUGGCQ68CJ6 796 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 PPP1R2P3Q6NXS1 205 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 PHLDB2Q86SQ0 1253 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 LARGE2Q8N3Y3 721 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 RIBC1Q8N443 379 aaPredicted RBP10.43□□□□□ -0.74
CD44-206ENST00000415148 KCNV2Q8TDN2 545 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 FAM84AQ96KN4 292 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 FAM118BQ9BPY3 351 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 TRIM7Q9C029 511 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 CCPG1Q9ULG6 757 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 NEU2Q9Y3R4 380 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 ASTN2O75129 1339 aaPredicted RBP10.42□□□□□ -0.74
CD44-206ENST00000415148 GOLGA8IPA6NC78 632 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 GOLGA8JA6NMD2 632 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 ALADP13716 330 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 ITGA8P53708 1063 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 CYP24A1Q07973 514 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 BNIP1Q12981 228 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 CRYMQ14894 314 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 FKBP1CQ5VVH2 108 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 LLGL2Q6P1M3 1020 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 CCDC89Q8N998 374 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 CLEC4DQ8WXI8 215 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
CD44-206ENST00000415148 VCPIP1Q96JH7 1222 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 IFT74Q96LB3 600 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 COL20A1Q9P218 1284 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 PRKAG3Q9UGI9 489 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 TBK1Q9UHD2 729 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 PCDHB2Q9Y5E7 798 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 ADGRA3Q8IWK6 1321 aa10.42□□□□□ -0.74
CD44-206ENST00000415148 TCP10L2B9ZVM9 353 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 THAP12O43422 761 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 PSTPIP1O43586 416 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CDH16O75309 829 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 ABHD2P08910 425 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 MMP10P09238 476 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 GARTP22102 1010 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 ADCY8P40145 1251 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 NPTX2P47972 431 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CCNHP51946 323 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 COPS2P61201 443 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 KRT76Q01546 638 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 NR1H3Q13133 447 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 DMP1Q13316 513 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 KLF1Q13351 362 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 KYNUQ16719 465 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 PPP1R21Q6ZMI0 780 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SV2AQ7L0J3 742 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 BZW1Q7L1Q6 419 aaKnown RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 TAS1R2Q8TE23 839 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CCDC127Q96BQ5 260 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 AGBL1Q96MI9 1066 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SH2D3AQ9BRG2 576 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 MOV10L1Q9BXT6 1211 aaKnown RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 RXFP1Q9HBX9 757 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 KIAA1586Q9HCI6 787 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 KCNK9Q9NPC2 374 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CHST7Q9NS84 486 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 ADAM22Q9P0K1 906 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 ZNF70Q9UC06 446 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms