RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 KIF4AO95239 1232 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 CCNE1P24864 410 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 ADAM9Q13443 819 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 MYO9BQ13459 2157 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 RBM43Q6ZSC3 357 aaKnown RBP17.85■□□□□ 0.45
LINC00398-201ENST00000414407 EFCAB13Q8IY85 973 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 GPR65Q8IYL9 337 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 MLKLQ8NB16 471 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 RDH13Q8NBN7 331 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 PDE11AQ9HCR9 933 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 IRAK3Q9Y616 596 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 PDCD11Q14690 1871 aaKnown RBP17.84■□□□□ 0.45
LINC00398-201ENST00000414407 BICDL2A1A5D9 508 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 TRAPPC3O43617 180 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 SOD2P04179 222 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 CTSAP10619 480 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 CD44P16070 742 aaKnown RBP17.84■□□□□ 0.45
LINC00398-201ENST00000414407 WNT7BP56706 349 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ERVFC1P60507 584 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 FKBP3Q00688 224 aaKnown RBP17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ENPEPQ07075 957 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ANKRD40Q6AI12 368 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 FUT10Q6P4F1 479 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 CD300LGQ6UXG3 332 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 TMC7Q7Z402 723 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 WDR49Q8IV35 697 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ZC3H3Q8IXZ2 948 aaKnown RBP17.84■□□□□ 0.45
LINC00398-201ENST00000414407 MKNK1Q9BUB5 465 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 HERC2P3Q9BVR0 1158 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 VN1R3Q9BXE9 311 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ZBP1Q9H171 429 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 NSUN3Q9H649 340 aaKnown RBP17.84■□□□□ 0.45
LINC00398-201ENST00000414407 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 SSX2IPQ9Y2D8 614 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
LINC00398-201ENST00000414407 ANO9A1A5B4 782 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 F8W810 466 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 CETN3O15182 167 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 MCCD1P59942 119 aaPredicted RBP17.83■□□□□ 0.44
LINC00398-201ENST00000414407 CLDN10P78369 228 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 SMC1AQ14683 1233 aaKnown RBP17.83■□□□□ 0.44
LINC00398-201ENST00000414407 DUOXA2Q1HG44 320 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 USP41Q3LFD5 358 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 USP37Q86T82 979 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
LINC00398-201ENST00000414407 TMC2Q8TDI7 906 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 MICAL1Q8TDZ2 1067 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 PPP2R3CQ969Q6 453 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 FNBP1Q96RU3 617 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 TCF25Q9BQ70 676 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 GPR62Q9BZJ7 368 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 CHST7Q9NS84 486 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 INTS13Q9NVM9 706 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 DPP3Q9NY33 737 aa17.83■□□□□ 0.44
LINC00398-201ENST00000414407 ANK1P16157 1881 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 PIRO00625 290 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 AKAP3O75969 853 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 TMEM191BP0C7N4 346 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 IRS1P35568 1242 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
LINC00398-201ENST00000414407 CASP4P49662 377 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 AP3M2P53677 418 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 PMS1P54277 932 aaKnown RBP17.82■□□□□ 0.44
LINC00398-201ENST00000414407 TFAMQ00059 246 aaKnown RBP17.82■□□□□ 0.44
LINC00398-201ENST00000414407 PAK1Q13153 545 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 CT47A1Q5JQC4 288 aaPredicted RBP17.82■□□□□ 0.44
LINC00398-201ENST00000414407 C9orf57Q5W0N0 161 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 MRPL43Q8N983 215 aaKnown RBP17.82■□□□□ 0.44
LINC00398-201ENST00000414407 C3orf58Q8NDZ4 430 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 PARD3BQ8TEW8 1205 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 NELFBQ8WX92 580 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 ANKRD36BP1Q96IX9 119 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 CGRRF1Q99675 332 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 ENTPD7Q9NQZ7 604 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 ITGA11Q9UKX5 1188 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 NUB1Q9Y5A7 615 aa17.82■□□□□ 0.44
LINC00398-201ENST00000414407 FSD2A1L4K1 749 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 SLC16A3O15427 465 aaKnown RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 CXCL14O95715 111 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 TNNC2P02585 160 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 GLUD2P49448 558 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 AARSP49588 968 aaKnown RBP eCLIP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 NLRP12P59046 1061 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 DSG1Q02413 1049 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 KLHL10Q6JEL2 608 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 TTI2Q6NXR4 508 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 INTS8Q75QN2 995 aaKnown RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 FAM186BQ8IYM0 893 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 C1orf127Q8N9H9 656 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 HASPINQ8TF76 798 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 SYAP1Q96A49 352 aaPredicted RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 CCDC127Q96BQ5 260 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 CEP63Q96MT8 703 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 CDCA3Q99618 268 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms