RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TMEM189-UBE2V1I3L0A0 370 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 PRPF6O94906 941 aaKnown RBP11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 YEATS4O95619 227 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 CASP1P29466 404 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 GBP2P32456 591 aaPredicted RBP11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 RPL9P32969 192 aaKnown RBP11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 MCM4P33991 863 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 ME1P48163 572 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 CASP5P51878 434 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 NTHL1P78549 312 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZXDAP98168 799 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 CREMQ03060 361 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 PPP2R3AQ06190 1150 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 ELMSAN1Q6PJG2 1045 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 TDRD5Q8NAT2 981 aaKnown RBP11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 ACCSQ96QU6 501 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 PLEKHA4Q9H4M7 779 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 PLEKHA5Q9HAU0 1116 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 GOLGA8IPA6NC78 632 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 GOLGA8JA6NMD2 632 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PRR33A8MZF0 331 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PPEF2O14830 753 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 CCL16O15467 120 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 POLR2DO15514 142 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 FAM189A1O60320 539 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZMYND10O75800 440 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 GAP43P17677 238 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 KYAT1Q16773 422 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PTPN21Q16825 1174 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PPM1LQ5SGD2 360 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 VARS2Q5ST30 1063 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 AXDND1Q5T1B0 1012 aaPredicted RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 L1TD1Q5T7N2 865 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PDXDC1Q6P996 788 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 DSTYKQ6XUX3 929 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 C15orf39Q6ZRI6 1047 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 CCDC149Q6ZUS6 474 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 GRASPQ7Z6J2 395 aaPredicted RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 CCDC65Q8IXS2 484 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 GPR65Q8IYL9 337 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 SYCP3Q8IZU3 236 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 GLIS3Q8NEA6 775 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZSWIM2Q8NEG5 633 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 SAAL1Q96ER3 474 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 BLZF1Q9H2G9 400 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ST6GALNAC4Q9H4F1 302 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 PCIF1Q9H4Z3 704 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 MTRRQ9UBK8 725 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 CPSF3Q9UKF6 684 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 UBQLN1Q9UMX0 589 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 MORC2Q9Y6X9 1032 aaPredicted RBP11.07□□□□□ -0.64
NCKIPSD-202ENST00000413374 TMEM221A6NGB7 291 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 M0R296 226 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 N4BP1O75113 896 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 C8AP07357 584 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 NFICP08651 508 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 PDIA4P13667 645 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 SCP2P22307 547 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 ADSSP30520 456 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 AFMP43652 599 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 CDR1P51861 262 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 ASIC1P78348 528 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 RAB33AQ14088 237 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZBTB6Q15916 424 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 E2F4Q16254 413 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 LIN9Q5TKA1 542 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 SLFN12LQ6IEE8 588 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 OTOP3Q7RTS5 596 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 GRAMD1CQ8IYS0 662 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 IQUBQ8NA54 791 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 BEST2Q8NFU1 509 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 CMASQ8NFW8 434 aaPredicted RBP11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 SLC7A14Q8TBB6 771 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 KCNG4Q8TDN1 519 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 HDAC7Q8WUI4 952 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 RSAD2Q8WXG1 361 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 KCNN1Q92952 543 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 FAM213AQ9BRX8 229 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 STRA6Q9BX79 667 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 WDR6Q9NNW5 1121 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 FBXW11Q9UKB1 542 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 RCOR1Q9UKL0 485 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms