RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CNOT6Q9ULM6 557 aaKnown RBP5.79□□□□□ -1.48
HMGB3P31-201ENST00000413333 PADI4Q9UM07 663 aa5.79□□□□□ -1.48
HMGB3P31-201ENST00000413333 MAGED2Q9UNF1 606 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P31-201ENST00000413333 NR2E1Q9Y466 385 aa5.79□□□□□ -1.48
HMGB3P31-201ENST00000413333 CEP83Q9Y592 693 aa5.79□□□□□ -1.48
HMGB3P31-201ENST00000413333 ARHGAP6O43182 974 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 SH3BP5O60239 455 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 MTHFD1P11586 935 aaKnown RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 HARSP12081 509 aaKnown RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 EN2P19622 333 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 CHKAP35790 457 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 TECP42680 631 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 GZMKP49863 264 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 NPEPPSP55786 919 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 RPS16P62249 146 aaKnown RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 TUBB8Q3ZCM7 444 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 ZNF568Q3ZCX4 644 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 ZNF783Q6ZMS7 281 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 SYTL1Q8IYJ3 562 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 CPXCR1Q8N123 301 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 CARFQ8N187 725 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 TXLNBQ8N3L3 684 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 CCT6BQ92526 530 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 MRI1Q9BV20 369 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 PACSIN1Q9BY11 444 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 GJB4Q9NTQ9 266 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 LUZP4Q9P127 313 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 SRRDQ9UH36 339 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 AFF4Q9UHB7 1163 aaKnown RBP5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 KCTD3Q9Y597 815 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 ATRNL1Q5VV63 1379 aa5.78□□□□□ -1.48
HMGB3P31-201ENST00000413333 BTN3A1O00481 513 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 FGF18O76093 207 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 MATN4O95460 622 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ATP5JP18859 108 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 GLDCP23378 1020 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 FLT3LGP49771 235 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 RAP2BP61225 183 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ADAM8P78325 824 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 SLC13A2Q13183 592 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 STARD3Q14849 445 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 TMEM95Q3KNT9 176 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ARL13BQ3SXY8 428 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF529Q6P280 563 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 GGT6Q6P531 493 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ATG14Q6ZNE5 492 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 UBE3BQ7Z3V4 1068 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF354CQ86Y25 554 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 SMAP1Q8IYB5 467 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 FAM9AQ8IZU1 332 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 RNF152Q8N8N0 203 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 GIMAP8Q8ND71 665 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ADAMTS17Q8TE56 1095 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 KBTBD7Q8WVZ9 684 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 BRI3BPQ8WY22 251 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ARL8AQ96BM9 186 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 LCORQ96JN0 433 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 TRIM54Q9BYV2 358 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 KCNH6Q9H252 994 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 BRD9Q9H8M2 597 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 JADE2Q9NQC1 790 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 COL20A1Q9P218 1284 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 SLC23A1Q9UHI7 598 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZDHHC8Q9ULC8 765 aa5.77□□□□□ -1.49
HMGB3P31-201ENST00000413333 A0A087WV62 115 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 hCG_1642624A0A1W2PR95 340 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 UBE2QL1A1L167 161 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 SH3D21A4FU49 640 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 TCAF2A6NFQ2 919 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 CXorf49A8MYA2 514 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 B4GALT4O60513 344 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 FGAP02671 866 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 TAL1P17542 331 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 TYRP1P17643 537 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 PSMC1P62191 440 aaKnown RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 HGFACQ04756 655 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 GRM1Q13255 1194 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 VMACQ2NL98 169 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 XP32Q5T750 250 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 OTUD7BQ6GQQ9 843 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 SEM1Q6ZVN7 128 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 ATP11CQ8NB49 1132 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 SLC35B2Q8TB61 432 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF566Q969W8 418 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 NMD3Q96D46 503 aaKnown RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 BRIP1Q9BX63 1249 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 ADAM7Q9H2U9 754 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 C12orf65Q9H3J6 166 aaKnown RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 IL23AQ9NPF7 189 aa5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P31-201ENST00000413333 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 RFXAPO00287 272 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 FFAR3O14843 346 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 GJB1P08034 283 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 ARFIP2P53365 341 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 ICA1Q05084 483 aa5.75□□□□□ -1.49
HMGB3P31-201ENST00000413333 CTBP1Q13363 440 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms