RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NCKAP1LP55160 1127 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 UBXN2AP68543 259 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 MOGSQ13724 837 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
SDCBP-202ENST00000413219 CAPRIN2Q6IMN6 1127 aaKnown RBP18.74■□□□□ 0.59
SDCBP-202ENST00000413219 TRABD2AQ86V40 505 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 VSIG1Q86XK7 387 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 DENND1AQ8TEH3 1009 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 PARD3BQ8TEW8 1205 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 SH3TC2Q8TF17 1288 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 SPDL1Q96EA4 605 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 RANBP17Q9H2T7 1088 aaKnown RBP18.74■□□□□ 0.59
SDCBP-202ENST00000413219 RNPEPL1Q9HAU8 725 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 EXOC7Q9UPT5 735 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 R3HDM2Q9Y2K5 976 aaKnown RBP18.74■□□□□ 0.59
SDCBP-202ENST00000413219 G3V3G9 751 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 PSTPIP1O43586 416 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 ALDH3A1P30838 453 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 MAGEA4P43358 317 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 RARRES1P49788 294 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 SPARCL1Q14515 664 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 LLGL1Q15334 1064 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 CDCA2Q69YH5 1023 aaPredicted RBP18.73■□□□□ 0.59
SDCBP-202ENST00000413219 MAEAQ7L5Y9 396 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 ZNF677Q86XU0 584 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 KIAA0825Q8IV33 1275 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 TTC25Q96NG3 672 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 SMG5Q9UPR3 1016 aaKnown RBP18.73■□□□□ 0.59
SDCBP-202ENST00000413219 LRRC42Q9Y546 428 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 KIF3CO14782 793 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 PROSCO94903 275 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 CALB2P22676 271 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 JAG1P78504 1218 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 ENPEPQ07075 957 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 TMED2Q15363 201 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 TAF11Q15544 211 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 MIS18BP1Q6P0N0 1132 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 PODNQ7Z5L7 613 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 CBWD2Q8IUF1 395 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 ZNF622Q969S3 477 aaKnown RBP eCLIP18.73■□□□□ 0.59
SDCBP-202ENST00000413219 NAF1Q96HR8 494 aaKnown RBP18.73■□□□□ 0.59
SDCBP-202ENST00000413219 LRRC37BQ96QE4 947 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 PPCSQ9HAB8 311 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 RAB20Q9NX57 234 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 PHTF1Q9UMS5 762 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 CHKBQ9Y259 395 aa18.73■□□□□ 0.59
SDCBP-202ENST00000413219 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
SDCBP-202ENST00000413219 KLRC2P26717 231 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 RASSF2P50749 326 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 SATB1Q01826 763 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 GCNT1Q02742 428 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 TNIP1Q15025 636 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 SEPT14Q6ZU15 432 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 FAM47EQ6ZV65 393 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ANKS1BQ7Z6G8 1248 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 USP37Q86T82 979 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ERP27Q96DN0 273 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 C9orf72Q96LT7 481 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 PWWP2AQ96N64 755 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 RBM15Q96T37 977 aaKnown RBP eCLIP18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ZHX2Q9Y6X8 837 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 NRXN2Q9P2S2 1712 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 COL2A1P02458 1487 aaPredicted RBP18.72■□□□□ 0.59
SDCBP-202ENST00000413219 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 GOLGA8IPA6NC78 632 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 GOLGA8JA6NMD2 632 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
SDCBP-202ENST00000413219 RALAP11233 206 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 CALRP27797 417 aaKnown RBP18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ADSSP30520 456 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 VPS41P49754 854 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 RASA2Q15283 850 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 PDK4Q16654 411 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 WASHC2DQ5SRD0 308 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 NIPA1Q7RTP0 329 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 KATNAL2Q8IYT4 538 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ARMC2Q8NEN0 867 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 CFAP61Q8NHU2 1237 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 STK32AQ8WU08 396 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 DEFB129Q9H1M3 183 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 CYP39A1Q9NYL5 469 aa18.72■□□□□ 0.59
SDCBP-202ENST00000413219 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 EXOC1LA0A1B0GW35 172 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 A6NHS1 94 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 TRAFD1O14545 582 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-202ENST00000413219 EDF1O60869 148 aaKnown RBP18.71■□□□□ 0.59
SDCBP-202ENST00000413219 PEX11AO75192 247 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 ENTPD3O75355 529 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 RHOT1Q8IXI2 618 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 ENDOVQ8N8Q3 282 aaKnown RBP18.71■□□□□ 0.59
SDCBP-202ENST00000413219 TAS1R2Q8TE23 839 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 CHURC1Q8WUH1 139 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 MFSD14AQ96MC6 490 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.71■□□□□ 0.592e-6■■■■■ 96.1
SDCBP-202ENST00000413219 PCDHAC2Q9Y5I4 1007 aa18.71■□□□□ 0.59
SDCBP-202ENST00000413219 ZNFX1Q9P2E3 1918 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms