RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 PSMD6Q15008 389 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 PDE12Q6L8Q7 609 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 RDH13Q8NBN7 331 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 BEST2Q8NFU1 509 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
TRAPPC12-203ENST00000411973 PODXLO00592 558 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 TADA2AO75478 443 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 B3GAT3O94766 335 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 SOD2P04179 222 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 CASP4P49662 377 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 ERVFC1P60507 584 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 ADAM9Q13443 819 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 VPS52Q8N1B4 723 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 TSG101Q99816 390 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 STXBP5LQ9Y2K9 1186 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
TRAPPC12-203ENST00000411973 SCN1AP35498 2009 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 PIRO00625 290 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 CTSAP10619 480 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 PMS1P54277 932 aaKnown RBP16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 MCCD1P59942 119 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 CCDC183Q5T5S1 534 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 FUT10Q6P4F1 479 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 MLKLQ8NB16 471 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 C3orf58Q8NDZ4 430 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 TCF25Q9BQ70 676 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 MKNK1Q9BUB5 465 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 GZF1Q9H116 711 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 ZBP1Q9H171 429 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 NGRNQ9NPE2 291 aaKnown RBP16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 CHST7Q9NS84 486 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 DPP3Q9NY33 737 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 IRAK3Q9Y616 596 aa16.71■□□□□ 0.27
TRAPPC12-203ENST00000411973 SF3B1O75533 1304 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 VWA8A3KMH1 1905 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 ANO9A1A5B4 782 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 CETN3O15182 167 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 AKAP3O75969 853 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 PAX3P23760 479 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 IGFBP6P24592 240 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 IRS1P35568 1242 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 GUCY2FP51841 1108 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 CLDN10P78369 228 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 FKBP3Q00688 224 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 ENPEPQ07075 957 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 ELAVL2Q12926 359 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 C9orf57Q5W0N0 161 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 CEP135Q66GS9 1140 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 TTI2Q6NXR4 508 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 TMC7Q7Z402 723 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 NELFBQ8WX92 580 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 FNBP1Q96RU3 617 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 BRWD1Q9NSI6 2320 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
TRAPPC12-203ENST00000411973 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TRIM49BA6NDI0 452 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TRAPPC3O43617 180 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 NLRP12P59046 1061 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 PAK1Q13153 545 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 SMC1AQ14683 1233 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 KIAA0319Q5VV43 1072 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TAS1R1Q7RTX1 841 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TMEM130Q8N3G9 435 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 MRPL43Q8N983 215 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 C1orf127Q8N9H9 656 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TMC2Q8TDI7 906 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 HASPINQ8TF76 798 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 CCDC127Q96BQ5 260 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 CGRRF1Q99675 332 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 ENTPD7Q9NQZ7 604 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
TRAPPC12-203ENST00000411973 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 LILRB3O75022 631 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 TNNC2P02585 160 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms