RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MCL1Q07820 350 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 MCM6Q14566 821 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 VARS2Q5ST30 1063 aaKnown RBP24.37■■□□□ 1.49
MSH6-202ENST00000411819 CWF19L1Q69YN2 538 aaKnown RBP24.37■■□□□ 1.49
MSH6-202ENST00000411819 MYCT1Q8N699 235 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 LRRC15Q8TF66 581 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 ATOH1Q92858 354 aaPredicted RBP24.37■■□□□ 1.49
MSH6-202ENST00000411819 NXPE3Q969Y0 559 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 IRF2BPLQ9H1B7 796 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 ZHX3Q9H4I2 956 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 H0Y858 1186 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 HNRNPDLO14979 420 aaKnown RBP24.36■■□□□ 1.49
MSH6-202ENST00000411819 RFX1P22670 979 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 MCM4P33991 863 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 ARPP19P56211 112 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 CUL4AQ13619 759 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 SLC10A6Q3KNW5 377 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 SLC44A3Q8N4M1 653 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 BLOC1S4Q9NUP1 217 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 TUBGCP4Q9UGJ1 667 aa24.36■■□□□ 1.49
MSH6-202ENST00000411819 CACNA1HO95180 2353 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 SYN3O14994 580 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 TBCAO75347 108 aaKnown RBP24.35■■□□□ 1.49
MSH6-202ENST00000411819 PDCP20941 246 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 RPL9P32969 192 aaKnown RBP24.35■■□□□ 1.49
MSH6-202ENST00000411819 CLCN5P51795 746 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 ROR1Q01973 937 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 HTR4Q13639 388 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 UVSSAQ2YD98 709 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 RAD54LQ92698 747 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 PARVGQ9HBI0 331 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 HCFC1R1Q9NWW0 138 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 CDH7Q9ULB5 785 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 CA14Q9ULX7 337 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 NUMBLQ9Y6R0 609 aa24.35■■□□□ 1.49
MSH6-202ENST00000411819 MYH15Q9Y2K3 1946 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 STK25O00506 426 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 CLTAP09496 248 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 SRFP11831 508 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 SPAG1Q07617 926 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 LARP4BQ92615 738 aaKnown RBP24.34■■□□□ 1.49
MSH6-202ENST00000411819 HAPLN2Q9GZV7 340 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 TBX20Q9UMR3 447 aa24.34■■□□□ 1.49
MSH6-202ENST00000411819 ZFP37Q9Y6Q3 630 aaPredicted RBP24.34■■□□□ 1.49
MSH6-202ENST00000411819 H7C4K7 107 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 NPR3P17342 541 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 AOC1P19801 751 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 ELF1P32519 619 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 TNFSF9P41273 254 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 PPP2R3AQ06190 1150 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 PABPC1LQ4VXU2 614 aaKnown RBP24.33■■□□□ 1.49
MSH6-202ENST00000411819 SLC8B1Q6J4K2 584 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 ITFG1Q8TB96 612 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 KIF12Q96FN5 646 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 WNT16Q9UBV4 365 aa24.33■■□□□ 1.49
MSH6-202ENST00000411819 WDR27A2RRH5 827 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 ANHXE9PGG2 379 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 PRRG1O14668 218 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 TRAK2O60296 914 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 LRG1P02750 347 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 POU2F2P09086 479 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 CTXN3Q4LDR2 81 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 SPECC1Q5M775 1068 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 GPR152Q8TDT2 470 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 FGF13Q92913 245 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 SUSD3Q96L08 255 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 PLEKHA5Q9HAU0 1116 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 DNMT3BQ9UBC3 853 aaKnown RBP24.32■■□□□ 1.48
MSH6-202ENST00000411819 CLIC4Q9Y696 253 aa24.32■■□□□ 1.48
MSH6-202ENST00000411819 KRBA1A5PL33 1030 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 MARCKSP29966 332 aaPredicted RBP24.31■■□□□ 1.48
MSH6-202ENST00000411819 ZNF131P52739 623 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 KYAT1Q16773 422 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 ZNF280DQ6N043 979 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 PARM1Q6UWI2 310 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 RTL10Q7L3V2 364 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 TMEM130Q8N3G9 435 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 ZNF461Q8TAF7 563 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 ING5Q8WYH8 240 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 FGF14Q92915 247 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 RTP3Q9BQQ7 232 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 FBXL5Q9UKA1 691 aa24.31■■□□□ 1.48
MSH6-202ENST00000411819 NOTCH4Q99466 2003 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 TTC26A0AVF1 554 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 PI15O43692 258 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 SCP2P22307 547 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 ZBTB41Q5SVQ8 909 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 MTSS1LQ765P7 747 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 APPL2Q8NEU8 664 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 DDX12PQ92771 950 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 KCNN1Q92952 543 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 FAM212AQ96EL1 285 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 EPSTI1Q96J88 318 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 MSTO1Q9BUK6 570 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 CCSER1Q9C0I3 900 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 RPF1Q9H9Y2 349 aaKnown RBP24.3■■□□□ 1.48
MSH6-202ENST00000411819 CYP4F11Q9HBI6 524 aa24.3■■□□□ 1.48
MSH6-202ENST00000411819 UBQLN1Q9UMX0 589 aaKnown RBP24.3■■□□□ 1.48
MSH6-202ENST00000411819 OGTO15294 1046 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 PIGRP01833 764 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms