RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SCP2P22307 547 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 SLC47A2Q86VL8 602 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 AGPAT1Q99943 283 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 TMEM117Q9H0C3 514 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 CERS4Q9HA82 394 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 ATP2C2O75185 946 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 SYN1P17600 705 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 CDC25BP30305 580 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 SARSP49591 514 aaKnown RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 NOL9Q5SY16 702 aaKnown RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 CTAGE3PQ8IX95 158 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 ZNF784Q8NCA9 323 aaPredicted RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 TMEM161BQ8NDZ6 487 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 OR5B17Q8NGF7 314 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 C12orf42Q96LP6 360 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 NXF3Q9H4D5 531 aaKnown RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 PRRG1O14668 218 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 EPHB6O15197 1021 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 GPR182O15218 404 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 ADRB2P07550 413 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 MMP3P08254 477 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 GNL1P36915 607 aaPredicted RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 PBX3P40426 434 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 SELENOSQ9BQE4 189 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 KIF9Q9HAQ2 790 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 EHD2Q9NZN4 543 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 HSF2BPO75031 334 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 MMEP08473 750 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 SLC26A2P50443 739 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 APLP1P51693 650 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 ZNF564Q8TBZ8 553 aaPredicted RBP12.14□□□□□ -0.47
SNX13-202ENST00000409604 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 MS4A14Q96JA4 679 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 ST3GAL5Q9UNP4 418 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 MAD1L1Q9Y6D9 718 aa12.14□□□□□ -0.47
SNX13-202ENST00000409604 THP07101 528 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 MTHFD1LQ6UB35 978 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 EMC1Q8N766 993 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ZNF296Q8WUU4 475 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 SPON2Q9BUD6 331 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 TIPINQ9BVW5 301 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 TXNDC16Q9P2K2 825 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ACKR2O00590 384 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 IRF1P10914 325 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ABCD1P33897 745 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 GPC5P78333 572 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ARHGEF19Q8IW93 802 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ZNF512Q96ME7 567 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 DHX35Q9H5Z1 703 aaKnown RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 RNF186Q9NXI6 227 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 PTPRZ1P23471 2315 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 PLIN4Q96Q06 1357 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 GOLGA8MH3BSY2 632 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ATP2A1O14983 1001 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 PLA2G6O60733 806 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 NFICP08651 508 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 SPATA2LQ8IUW3 424 aaPredicted RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 CCDC170Q8IYT3 715 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 MRPL47Q9HD33 250 aaKnown RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 CYB561D2O14569 222 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 TMC7Q7Z402 723 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ZC3H18Q86VM9 953 aaKnown RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 GSPT2Q8IYD1 628 aaKnown RBP12.13□□□□□ -0.47
SNX13-202ENST00000409604 PGBD4Q96DM1 585 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 STK33Q9BYT3 514 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
SNX13-202ENST00000409604 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
SNX13-202ENST00000409604 HMGCRP04035 888 aa12.12□□□□□ -0.47
SNX13-202ENST00000409604 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
SNX13-202ENST00000409604 PLTPP55058 493 aa12.12□□□□□ -0.47
SNX13-202ENST00000409604 BASP1P80723 227 aaKnown RBP12.12□□□□□ -0.47
SNX13-202ENST00000409604 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
SNX13-202ENST00000409604 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms